KEGG   Panicum virgatum (switchgrass): 120679507
Entry
120679507         CDS       T07260                                 
Name
(RefSeq) uncharacterized protein At4g14342
  KO
K12832  splicing factor 3B subunit 5
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120679507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120679507
Spliceosome [BR:pvir03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120679507
 Complex B
    120679507
 Complex C
   U2 SnRNP specific factors
    120679507
SSDB
Motif
Pfam: SF3b10 TAM12 HA_Alsin
Other DBs
NCBI-GeneID: 120679507
NCBI-ProteinID: XP_039817052
LinkDB
Position
6N:complement(41170053..41173633)
AA seq 87 aa
MQASDRFNINSQLEHLQAKYVGTGHADLTRFEWAVNIQRDSYASYIGHYPMLAYFAIAEN
ESIGRERYNFMQKMLLPCGLPPERDED
NT seq 264 nt   +upstreamnt  +downstreamnt
atgcaggctagcgataggttcaacataaactctcagcttgagcatcttcaagccaaatat
gtcggtacagggcatgctgacttgaccagatttgaatgggctgtgaacatccagagggac
agctatgcctcttatattgggcactatccaatgttggcgtactttgccattgctgagaat
gaatcgattggaagagaacgttacaatttcatgcagaaaatgctgcttccttgtggtctc
cctcctgagagagacgaagactga

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