Panicum virgatum (switchgrass): 120679511
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Entry
120679511 CDS
T07260
Name
(RefSeq) putative chloride channel-like protein CLC-g
KO
K05016
chloride channel 7
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120679511
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120679511
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120679511
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120679511
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
120679511
Ion channels [BR:
pvir04040
]
Chloride channels
Chloride channel (CLC)
120679511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TB
Motif
Other DBs
NCBI-GeneID:
120679511
NCBI-ProteinID:
XP_039817055
LinkDB
All DBs
Position
6N:complement(34117590..34128133)
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AA seq
796 aa
AA seq
DB search
MAPPLEDHHMEEEAEEQRPPLTRALLHRSATTNTSQVAMVGSNQCPIESLDYEIIENDLF
DQNWRTRSKVDKVRYVVLKWTFCFAIGILTGIVGFVINLAVENVSGFKHDAVSALMESAS
YWTAFWLFAGCNMVFLLFASSITAFVSPAAGGSGIPEVKAYLNGVDAPNIFSMRTLAVKI
AGNIAAVSSSLHVGKAGPMVHTGACIAAIFGQGGSRKYGLTCRWLRYFKNDRDRRDLVTI
GAGAGVAAAFRAPVGGVLFALESLSSWWRSALIWRSFFTTAVVAVVLRLFIELCGSGRCG
VFGQGGLIMYDVSTVFDNLMTYHLKDIPIVVIIGVTGALLGALYNFLMMKVLRVYNMINE
RGGAHKLMLAATVSMLTSCCIFGLPWLAPCRPCPTKGTPADGTCHALNRFRRFHCPPGHY
NDLASLFLNINDDAIRNLYSTGTSDVYHPGSMVTFFVASYGLGVLSYGVVAPSGLFVPII
LTGATYGRLVAMLLGRHSGLDHGLVAILGSASFLGGTIRMTVSVCVIILELTNNLLLLPL
VMLVLLISKTVADSFNSSIYDLILQLKGLPHLDGHAEPYMRQLAVGDVVAGPLRSLGGVE
KVGNVVHTLRTTGHHAFPVVDEPPFAPAPVLYGLVLRAHLLVLLKKREFLAAPERYPKEY
VAARFLPEDFDKRGSGKQDTIGDTIADVQLSSEEMEMYVDLHPFTNTSPYTVVETMSLAK
ALVLFREVGLRHLLVVPKACDRSPVVGILTRHDFMPEHILGLHPVLVGSRWKRLRWHKGA
AAKYFRSLLEWIANSG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgccgctggaggatcatcacatggaagaggaggcggaggagcaacggccgccc
ctcaccagggccctcctccaccgcagcgccaccaccaacacctcccaggtggccatggtc
ggctccaaccagtgccccattgagagcctggactacgaaataatagagaacgacttgttc
gaccagaactggaggacgaggtccaaggttgacaaggtgcggtacgtggtgctcaaatgg
accttctgcttcgccatcggtatcctcaccgggatcgtcggcttcgtgatcaacctcgcc
gtcgagaacgtctccgggttcaagcacgacgccgtgtccgcgctcatggaatccgccagc
tattggacagccttctggttgttcgccggctgcaacatggtgttcctgctgttcgcgtca
tcgataacggccttcgtgtcgccggcggccggcggttctggcatcccagaggtgaaggcc
tacctcaacggcgtggacgcgccgaacatcttctcgatgcggaccctcgctgtcaagata
gcagggaacattgccgccgtatcgtcctctttgcatgttggcaaagcaggaccaatggtt
cacaccggggcgtgcatcgctgcgatcttcgggcagggaggctcacgcaagtacggcctc
acctgccgctggctacgctacttcaagaatgaccgtgaccgccgtgacctcgtgaccatc
ggcgccggcgctggtgtcgcggccgcgttccgtgcgccggtgggcggtgtgctcttcgcc
ctcgagtccctctcatcatggtggcggagcgcgctgatctggcgatccttcttcacgacg
gcggtggtggcggtcgtcctgcggctattcatcgagctttgcgggtccgggagatgcggg
gtctttggccagggcgggcttatcatgtacgacgtgagcacggttttcgacaaccttatg
acctaccacctcaaggacatccccatcgtcgtcatcatcggcgtcaccggcgcactcctt
ggggccctctacaacttcctcatgatgaaggttctacgagtctacaacatgatcaatgag
agaggcggagcacacaagctaatgttggcggccaccgtctctatgctaacgtcgtgctgc
atcttcggcctgccgtggctcgcgccatgccggccgtgccccacgaaggggactccagca
gacggcacctgccacgcgctgaaccgtttccggcggttccactgccctcccggccactac
aacgacctggccagccttttcctcaacatcaacgacgacgccatccgcaacctctactcc
accggcaccagcgacgtctaccacccgggctccatggtcaccttcttcgtggcgtcgtac
ggtctcggcgtgctcagctacggcgtggtcgcgccgtcggggctgttcgtccccatcatc
ctcaccggcgccacgtacgggcgcctcgtcgccatgctgctcggccgccactccggcctc
gaccacggcctcgtcgccatcctcggctcggcctccttcctcgggggaacaatccggatg
acggtgtccgtgtgcgtcataatcctcgagctcaccaacaacctgctcctcctgccgctg
gtcatgctcgtgctcctcatctccaagacggtcgccgactccttcaactccagcatctac
gacctcatcctgcagctcaaggggctgccccacctcgacgggcacgccgagccgtacatg
cggcagctcgccgtcggcgacgtcgtggccgggccgctgcggagcctcggcggcgtggag
aaggtcgggaacgtcgtgcacacgctccgcacgacggggcaccacgcgttccccgtcgtc
gacgagccgcccttcgcgccggcgccggttctgtacgggctggtgctgcgcgcgcatctc
ctggtgctgctgaagaagagggagttcctggcggcgccggagcggtacccgaaagagtac
gtggcggcgaggttcctgccggaggacttcgacaagcgagggtccgggaagcaggacacc
atcggcgacaccatcgccgacgtgcagctctcgtcggaggagatggagatgtacgtggac
cttcacccattcaccaacacgtcgccgtacacggtggtggagaccatgtcactggcgaag
gcgctcgtgctgttccgggaagtcgggctgcgccacctccttgtcgtgcccaaggcctgc
gacaggtcgccggtggtcggcatcttgacgaggcatgacttcatgccggaacacatcctg
gggttgcacccagttctggtgggaagccggtggaagaggctccggtggcacaagggcgcc
gcggccaagtacttccgctccctcctcgagtggatcgccaatagcggctga
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