Panicum virgatum (switchgrass): 120679849
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Entry
120679849 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120679849
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120679849
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120679849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
Sina_RING
zf-RING_5
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
TerY_C
DUF2039
UBZ_FAAP20
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120679849
NCBI-ProteinID:
XP_039817450
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All DBs
Position
6N:complement(45741429..45745006)
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AA seq
411 aa
AA seq
DB search
MGLWCSKENQSRGWQPHDYNHNHNHNHSNGAAAASKGGKNRYAKIGDDYHTLEQVTDALA
HAGLESSNLIVGIDFTKSNEWTGRVSYNNRSLHAMGNTPNPYEQAISIIGRTLARFDEDN
LIPCFGFGDTTTHDQSVFSFHHDNQPCDGFEQALARYRELVPQLNLAGPTSFAPIIETSI
GIVDSSGGQYHVLLIIADGQVTRSVETGSGRLSPQERETVDAIVKASDYPLSIVLVGVGD
GPWDMMRQFDDNIPSRAFDNFQFVNFTQIMSRPIPTSKKEAEFALSALMEIPEQFKAAMS
LQLLGKRRGFPNRPVLPPPVSDRQQYSGCSAVKHAQSTSYGAAPKTPPAPQTPSAPPQDS
DIGDPQTCPICWNQAKDLAFGCGHQTCSDCAKDLKVCPMCQKAISVRLKLY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggttgtggtgctccaaggagaaccagtccagggggtggcagccgcacgactacaac
cacaaccacaatcacaatcacagcaacggtgccgcggctgcgagtaaagggggcaagaac
cggtacgccaagatcggcgacgattaccacaccctggagcaggttactgatgcccttgca
catgctggtctagagtcttcaaatctgattgttgggattgatttcacaaagagcaatgag
tggacaggcagagtgtcctacaacaaccggagcttgcacgcaatgggaaacactccaaac
ccatatgagcaggctatttctatcatagggagaacccttgcacgctttgatgaggataac
ctgataccatgctttggatttggagatacgactactcatgatcagtcagtatttagcttc
catcatgataaccaaccgtgtgatggcttcgagcaagcacttgctcggtacagggaactc
gttccacaacttaatctggctggtccaacttcatttgcaccaatcattgagacgtctatt
ggaattgttgatagtagtggtggccagtatcatgtcctgctcataatagcagatggacag
gttacacgcagcgttgaaacaggcagtgggcggttgagcccacaggaaagggagaccgta
gatgccattgtgaaggctagtgactaccctctttcaattgtacttgttggggttggtgat
gggccatgggacatgatgaggcaattcgatgataacataccttctcgggcatttgacaat
tttcagtttgtgaacttcacacagatcatgtcaagacctatacccacaagcaaaaaggag
gcagaatttgctctttcagcattgatggagatcccagaacagttcaaggcagcaatgagt
cttcagcttcttggcaaacgaaggggatttccaaaccgaccagtgttgcctccgcctgtg
agcgatcgccaacaatactctggatgttcagcagtcaaacatgcccaatctactagctac
ggagcagcaccgaaaaccccaccggcgcctcaaaccccatcagcgcctccacaggacagc
gatataggagatccacagacctgtccaatctgctggaaccaagcgaaggaccttgctttt
ggttgcggccatcagacgtgctctgactgcgctaaggacctgaaggtgtgcccgatgtgc
caaaaggcgatctccgtgaggctgaaactctactga
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