Panicum virgatum (switchgrass): 120679905
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Entry
120679905 CDS
T07260
Name
(RefSeq) GDT1-like protein 4
KO
K23541
Ca2+/H+ antiporter, TMEM165/GDT1 family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120679905
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120679905
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Others
Others
120679905
Transporters [BR:
pvir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120679905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDT1
OFeT_1
Motif
Other DBs
NCBI-GeneID:
120679905
NCBI-ProteinID:
XP_039817497
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All DBs
Position
6N:complement(49164001..49167041)
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AA seq
283 aa
AA seq
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MHRRAPAAALLVVLALSVSVSVCAAADQVANGAAGNGTGAGAARLDRRTKMFLQTARARG
DSAAAQEPGLGLFDAFFASLSIIVVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMT
VLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKASQKKEIEEVEEKLEA
GQGKSTFRRVFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAIGVATGATLGHT
ICTSIAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYPPL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggcgcgcccccgccgcggccctcctcgtcgtcctcgcgctctccgtttctgtt
tccgtctgcgctgccgccgaccaggtcgctaatggcgctgctgggaatggcaccggcgcc
ggcgccgcccgactggaccggcgcaccaagatgttcctccagacggcgcgggcgcgcggg
gactctgctgcggcgcaggagccgggccttgggctcttcgacgccttctttgccagcctg
tccatcatcgtcgtcagcgagattggggatgagacgttcatcatcgcggcactgatggcg
atgcggcaccccaagtcgacagtgctctctggggcactgtcggcgctggtcgttatgaca
gtgctgtcaactgggctaggcagaattgttccaaatttgatatcaaggaagcacactaac
agcgcagcaactgtcctttatgcattctttgggctacgtctgctgtacattgcctggaga
tcagattccaaggcatcgcagaaaaaggaaatagaagaagtagaggaaaagctggaagca
ggtcaagggaagtcaacatttagacgtgttttctcgagattctgcactcctattttcttg
gagtcatttgtgttgaccttcctagcagagtggggcgaccggagtcagatagctacgatt
gcgctggcaacgcacaaaaacgcgatcggtgttgctacaggagcaaccttggggcacacc
atctgcacatcgattgcggtggtgggtggcagcatgctggcgtccaagatatctcagggc
acggttgcgaccattggaggcctcctcttcctcgggttctctctttcgtcgtatttctac
ccaccattgtag
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