KEGG   Panicum virgatum (switchgrass): 120679925
Entry
120679925         CDS       T07260                                 
Name
(RefSeq) DNA polymerase epsilon subunit B-like
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03030  DNA replication
pvir03410  Base excision repair
pvir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120679925
   03410 Base excision repair
    120679925
   03420 Nucleotide excision repair
    120679925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120679925
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120679925
Enzymes [BR:pvir01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     120679925
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    120679925
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      120679925
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT DNA_pol_D_N CcmE
Other DBs
NCBI-GeneID: 120679925
NCBI-ProteinID: XP_039817519
LinkDB
Position
6N:43170049..43175489
AA seq 533 aa
MAPPSAATRRKLQRKFRLRGFTLKVDALEEAAAFLERFPEAEDDALDLLLDELDKEPLQS
SILDRDAIRRVVALLVEAEEAVDAASPAVTSARSALRVVDAFLVPRFHYDPIKKVFYEHT
GRLPIHGEAGDKASLYRDRYQVLLQRLSRDKYFSKPAFDTVVTEDGSCEITSIQSLIGCT
GRRWIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQV
NTCGFPPLEDREASLSLLMGLDFFGGGVIPTEETLRLSSLEKKAVNDMFVILSDVWLDNP
ETMEKLAIVLDGYDSVEVLPSLFVLMGNFCSRPCNLAFNSFEELRLQFGKLGEIIAARSR
LKEHSRFLFVPGPDDAGPSKALPRCALPKYLVEELQKHIPNAIFVSNPCRVKFYTQEIVF
FRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQGHLCPLPLTVQPIIWNYDHCLRLY
PTPHTIVLADKSEQKAFKYTGITCFNPGSFANDSTFAAYRPCTKEVELSALEG
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggcgccgccgtcggcggccacgcgcaggaagctgcagcgcaagttccgactacgcggg
ttcaccctcaaggtcgacgccctcgaggaggcggccgccttcctcgagcgcttccccgag
gccgaggacgacgcgctcgacctcctccttgacgagctcgacaaggagccgctgcagtcg
tcgatactggatcgggacgcgatccgacgcgtggtggcgctgctcgtcgaggcggaggag
gcggtcgacgcggcgtcgccggcggtcaccagcgcccggtccgcgctgcgggtggtggac
gcgttcctcgtgccgcgcttccactacgacccaatcaagaaagtgttctacgagcacaca
ggcagattacctatccatggagaagctggagataaagcctccctttatagggacaggtac
caagtgctacttcagaggctatctcgcgataaatatttctctaagccagcttttgacaca
gttgtgactgaagatggcagttgtgagattacttctatacagtctctaattgggtgcact
ggacggagatggattatgggggtcatttcacagttggaggagcgccaattctacttggag
gatcttactggagcagttccaattgacttatcaaatgccaaaatcacgtcaggttttttt
gttgaaaatactgtaatcgtggctgaaggggagctgctttcaaatggcattttccaggtt
aatacatgtggatttcctcctttagaggacagagaagcatcactttcattgctcatgggt
cttgatttcttcggaggaggtgtgataccaactgaagaaacactaagattatcgtcactc
gaaaaaaaggctgtgaatgatatgtttgtcatactttcggatgtttggctggacaatcct
gagactatggagaagttggctattgttcttgatggttatgatagtgtggaagtgctgcct
tccctctttgttttgatgggcaatttctgctctcgtccctgcaatctagcattcaattct
tttgaagaacttagattgcaatttggaaagcttggtgagataattgcagctcgatctaga
ttaaaggagcatagccgtttcttattcgttccaggtcctgatgatgcaggcccttccaaa
gctctcccaaggtgtgcacttccaaaatacctagttgaagaacttcagaagcacatccca
aatgcaatattcgtaagcaacccctgcagggtgaagttttatacccaagaaattgtgttt
ttccggcaagatctcctttacaggatgcggcggtcatgtcttattccaccaacaactgaa
gaaacaagtgacccttttgagcatctggtagcaactattacccatcagggtcatctttgt
ccattgcctcttactgttcaacctatcatatggaattacgatcattgccttcggctgtat
ccaactcctcacacaatagtattggctgacaaaagcgagcagaaagccttcaaatacact
ggaattacttgctttaatccaggttcgtttgcaaatgatagcacctttgcagcataccga
ccttgcactaaggaggttgaactttctgcactagaaggctaa

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