Panicum virgatum (switchgrass): 120679999
Help
Entry
120679999 CDS
T07260
Name
(RefSeq) heat stress transcription factor B-2b-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120679999
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
120679999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
120679999
NCBI-ProteinID:
XP_039817580
LinkDB
All DBs
Position
6N:complement(51568407..51570424)
Genome browser
AA seq
398 aa
AA seq
DB search
MAAEQAAAATGGEPPPATPQPAEGVTAAAGQRSVPTPFLTKTYQLVDDPAVDDVISWNND
GSAFVVWRPAEFALDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGEKRL
LCDIHRRKVTPATATGAAVTVAAAAAAAIPMALPVGSPVYSGEEQVLSSSSSPEPPPLQP
QAASGSGSGGAASGGDAGEENDRLRRENARLARELGQMKKLCNNILLLMSKYAATQQLDA
AKAAAAGNCSGESSEAAATLPSVLELLPSCRGGPAPAAALEPPEAAAGTEREQDDDDKAG
ARLFGVSIGRKRARDDTSNGHAGGAAAEVKAEPVDAHPDHHLHQLPQLRDDDHHHGGTEP
QAWPIYRPRPVYHPLRACNGSAGSAGTGSDHDVSNSSR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgagcaggccgccgccgccacgggaggcgagccgcctccggccacgccgcag
ccggcggagggcgtgacggcggcggcggggcagaggtcggtgcccaccccgttcctcacc
aagacgtaccagctggtggacgacccggcggtggacgacgtcatctcgtggaacaacgac
ggctccgccttcgtcgtgtggcgccccgccgagttcgcgctcgacctcctgcccaagtac
ttcaagcacaacaacttctccagcttcgtgcggcagctcaacacctacgggttcaggaag
atcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggggagaagcggctg
ctctgcgacatacaccgccggaaggtgacgccggccacggccacgggggcggcggtcacg
gtggctgccgccgccgccgcggccatcccgatggcgctgcccgttggctcgccggtctac
tcgggcgaggagcaggtgctgtcgtcgagctcgtccccggagcccccgccgctgcagccg
caggcggcatccggctcgggctccggcggcgcggcgtccggcggcgacgcgggcgaggag
aacgaccggctgcgccgcgagaacgcgcgcctcgcgcgggagctcggccagatgaagaag
ctctgcaacaacatcctcctcctcatgtccaagtacgccgccacccagcagctggacgcc
gccaaggccgcggcggcggggaactgctccggcgagtcgtcggaggccgccgccacgctg
ccgtcggtgctggagctcctgccctcgtgccgcggcggccccgcgcccgcggccgccctg
gagccgcccgaggcggcggcggggacggagcgcgagcaggacgacgacgacaaggccggc
gcgaggctgttcggcgtctccatcggtcggaagcgcgcgcgcgacgacaccagcaacggc
cacgccggcggcgcggcggcggaggtgaaggcggagccggtggacgcgcaccccgaccac
cacctccaccagctgccacagctcagggatgatgatcatcatcacggcggaacggagccg
caggcgtggcccatctaccggcccaggcccgtgtaccacccgctccgggcctgcaacggg
tcggcgggcagcgccgggaccgggagcgaccacgacgtgtccaactcctccaggtga
DBGET
integrated database retrieval system
