KEGG   Panicum virgatum (switchgrass): 120680005
Entry
120680005         CDS       T07260                                 
Name
(RefSeq) uncharacterized protein LOC120680005
Organism
pvir  Panicum virgatum (switchgrass)
SSDB
Motif
Pfam: AMP-binding PP-binding NAD_binding_8 Amino_oxidase Catalase AMP-dom_DIP2-like ACP_SdgA_C DAO Pyr_redox_3 Thi4 FAD_binding_2 Pyr_redox_2 Pyr_redox FAD_binding_3 GIDA NAD_binding_9 HI0933_like FAD_oxidored
Other DBs
NCBI-GeneID: 120680005
NCBI-ProteinID: XP_039817591
LinkDB
Position
6N:complement(51077348..51085754)
AA seq 2412 aa
MDPGKSIDNKFSKLHPSLPVDTRIGIVGAGPSGLSAAYALAKLGYHNVTVFEKCQNVSGM
CESIDIEGRTYDLGGQVIAANSAPVITHLAKELGSEFEEMDSHKLALIDSKTGNIRDLEV
AEDYVSMVSLTLKLQDEANRSGRVGIHAVSGLASDPTLEFLKQHGLSSVPKSVAYGYTAS
GYGFVQDMPYAFIQEFTRTSMAGKIRRFKHGYMSLWEKLSQSLPFEVLRGTEVLRVKRDS
RSASVHIKNNNNDIEVREFDKIILSGSIAFKNGKTYRSLSLTDGENEVVELNDLERELFS
KVQTIDYYTTVVKIEGFEHMPKGFYYFGEYMEDPTTIGHPVAMQRFFADTNIFLFWSYGN
SADIKGSYVAKCVTDVVTSMGGTVQSVLLQRRFKYFPHVSSEDMKNGFYERVESQLQGFQ
NTYYVGGLLAFELTERNALYSISAVCKHFAIDSELPPVPYVKRLFPLSTRNPSPPRDIGE
LEGVEFPDLPSLDGYLQYWGTHKVTAKKVIYTWINEEGKIMNRRTYQELHDNASRIAYKL
LTSTKPIIKPGDRVLLIHLPGLEFVDAFFGCIRAGVIPVPVLPPDPMQMGGQALLKVDNI
SKACNAVAILSTSSYHAAVRAGYVKNIVTLAKSAQKCSAQWPDLPWIHTDSWIKNYRRSP
DSYNSESAESMITKPQPSELCFLQFTSGSTGDAKGVMITHGGLIHNVKMTKKRYRSTSKT
VLISWLPQYHDMGLIGGLFTALVSGGTSILFSPMTFIRNPLLWLKTINDYRGTHSAGPNF
AFELVIRRLEAEKNKIYDLSSLIFIMIAAEPVRQKTVKRFIELTQPFGFSEGVLAPGYGL
AENCVFVSCAFGECKPVFIDWQGRVCCGYVDPDDTDIVIKIVDVDSLTEHQEDGAEGEIW
ISSPSSGVGYWNNKEISQKTFCNQLKNYPNKNFTRTGDLGRIIAGKLFITGRIKDLIIVA
GRNIYSADVEKTVEGSSDVLRPGCCAVVGVPEEVLTQKGISIPDSSDQVGLVVIAEVREG
KAVSEEIVDNIKTRVAEEHGVTIASVKLIKPRTISKTTSGKIRRFECMKQFVDNTLSLAN
SNHISKKKSLFRSLTTGTGMEIRRPSLKHTIDPTFRPQIRSKVKNSMQIIEFLTQLVSDQ
TGIPKEKISPTDSLPSYGFDSIAVVRAAQKLSDFLDTPVGAIDIFTASCISELAKFLENL
VHKSQPQLAPQPRGKVKKSKEIIEFLKQIVSDQTGIPKDKISPTDSLPSYGFDSITVVRA
AQKLSDFLGIPVGAIDIFTASCIDELATFLENLVHKSQPQLDPDESCSAEDENLAIIDTS
SSDLSVFATGTLQLLALTYVCFILLLPAYLASSMYMGMLSSVSLVKLPLLSYLSSLVLAP
IAWICYALFTSLSLAILGKSFLQPNYVLTPDVSIWSVDFVKWWALSKAQSLAAKMLAVHL
KGTIFLNYWFKMQGARIGSSVVIDTIDITDPSLLAVADGAVIAEGVLILGHEVRNEVLSF
RHVKIGQKASISPYAVLQKGTIVPNGVVVPPLQKTEQGKSTCLASKASAYMKEEARIADM
VFEHLFSIYAVGFLGALSSATVFMSYSHFSGTATSLQHFSFACIAGAFHWLPAVIAAYAV
IVRETTMSPVSSAFFLAFAYLSYGIILSLLTSITNKALATRSGSKKKDIASLIQRRIIIA
AHLRFAKMLSGTEAFCMYLRLLGAKIGRHCSIRAINPVANPELISVGDGVHLGDFCNIVP
GFYSKGFTSAEIKVQDNTVVGSGSLLLPGSALQENVILGALSVAPQGSVLQQGGVYVGAQ
SLTLVKNTLIAEDERIEEMDPLYKKIVGNLAANLAITTMNVKSRYFHRIGVSGRGVLRMY
QDIPSLPKHKIFDAGKSFPVIIRHSNSLSADDDARLDARGAAVRILSDDGEVPLLDLTLK
SGKAFYARTIADFATWLVCGLPAREEQVKQAPHIRDAVWGSLRNTDSYTVLHYYSNICRL
LRFEDGKEMYAKFKLRPVDKDVSEDSGQVVPRGILPPETGAIPRDADDTRPLLFLADDFR
RKVEAPEGVRYVFQLQLRDVPADSAARDAALDCTRPWDEAEFPYIEVGEVSLSSNVPTEE
TEKLEFNPFLRCPEVDVIPATSCTQSASIDHGRSLVYEICQRLRNGEPLPASWRAFLDQS
DTKIDLSGCPVMAATRSSSNVRHATTKVTLARTWYQALWATLCQPLLQTLVPYFAMGLVI
FLPLRGLLAVSTATGTPLYWSLPIFWVTSGVAAMATCAVAKWALVGCRADGDTVHIWALA
VFLDTVWQAVRTATAEYFAELTPGSVLFAAWMRAMGASVAAADGVYVDSMGVLLNPEMVR
LERGASVGRDALLFGHVYEGEGGEVKFGTVHVGEDGFVGSRAVAMPDVRVDDGGCLGALG
LAMKEEIVRNRM
NT seq 7239 nt   +upstreamnt  +downstreamnt
atggatccaggaaaatcaattgataataaattcagcaagttgcatccaagtttaccagta
gacacaagaattggcatagttggagcagggccaagtggcttatcagcagcatatgcacta
gctaagctaggttatcacaatgtaactgtgtttgagaaatgccagaatgtttcagggatg
tgcgagtccatcgacatcgaaggaaggacatatgatttgggaggacaagttatagcagca
aacagtgcccctgttataactcacctggcaaaggaactaggttctgaatttgaagagatg
gattcgcacaagcttgctctgatcgacagcaaaacaggaaacattagagatcttgaagtg
gctgaggactatgtgtccatggtatctctaacgctaaaattacaggatgaggcaaatagg
tcagggcgagtgggaattcatgctgtcagtggattggcatcagatccaactcttgagttc
ttgaagcaacatggattgagttcagtgccaaaatctgtagcatacggttacactgcttct
ggctatggttttgttcaagacatgccctatgctttcatacaggagtttactagaacctct
atggctggcaagatccggcgtttcaagcacggttacatgagcttatgggagaaacttagt
cagtcattaccatttgaagttcttcgtggcacggaggttctgagagtcaagcgtgacagt
cgcagtgcaagtgtacatatcaagaacaacaataatgacatagaagttagggagtttgac
aaaatcatattgtcaggttctattgctttcaagaatggtaaaacatatcgatctttgagt
ctgaccgatggagaaaatgaggtggtagaattgaatgatcttgaaagagaactattcagt
aaggtacagacaattgactactatactactgttgttaagattgaaggatttgagcacatg
ccaaagggcttttactactttggagaatacatggaggatccaacaacaatagggcatcca
gtggcaatgcaaagattctttgctgacacaaatattttcttgttctggtcttatgggaat
tcagcagacatcaagggctcgtatgtggctaaatgtgtaactgatgtcgtgacttctatg
gggggaactgtgcaaagtgtgcttttacagcggcgattcaagtatttccctcatgtcagc
agtgaagacatgaaaaatggcttctacgagagggtggagtctcagttgcaaggctttcag
aacacttactatgttggaggtctgctggcatttgagctaactgaaagaaatgcattatac
tccatttcggctgtttgtaaacactttgccattgacagtgagctacccccggttccttat
gttaagagattgtttcctctgtccacaagaaatccttcacctcctagagacattggtgag
cttgaaggggttgaattccctgatcttccatccctggatggatatttgcaatactgggga
actcataaagtcactgcaaagaaggttatctacacttggatcaatgaagaagggaagatc
atgaatcgtagaacctaccaagagcttcatgataatgcgtctcgcattgcatataaacta
ttgacaagcacgaaacctattatcaagcctggtgacagagttctccttattcatctacct
ggtttggagtttgttgatgcattcttcggatgcatcagagcaggagttataccagtccca
gttttgccccctgacccgatgcaaatgggtgggcaagcacttctgaaagttgataatatc
tctaaggcgtgcaatgctgtggcaattctatccacctcttcataccatgctgctgtacgt
gcaggttatgtcaagaatattgtcactctagcaaagagtgctcagaaatgctcagctcag
tggcctgacctcccatggattcacaccgactcatggataaagaactatcggcgaagtcca
gacagctacaactcagaaagtgctgaatctatgattaccaagccccagccaagtgaattg
tgctttctacaattcacttcgggttccaccggtgatgccaagggtgtgatgataacacat
ggtggactaatccacaatgtgaagatgacgaagaagcgatatagaagtacctcaaaaact
gtcctcatcagttggcttccacagtaccatgacatgggtctaatagggggtcttttcact
gctcttgtaagtggaggaacttcaattctattttcaccaatgacatttatcagaaacccc
ctattgtggctgaaaacaataaatgactaccgtggaacacatagtgcaggtccaaacttt
gcatttgaactggtgataagacggcttgaggctgagaagaataaaatttatgacctttct
tcattgatcttcatcatgattgcagcagagccagtaaggcaaaagactgtcaaaaggttc
attgagttgactcaacctttcggcttttctgaaggtgtacttgctcctgggtacggcctt
gctgagaactgtgtctttgttagctgtgcctttggtgaatgcaagcccgttttcatagat
tggcaaggaagagtttgttgtgggtatgttgatccagatgatacagatattgtcatcaaa
attgttgatgtagactctttgacagagcatcaggaggatggtgctgagggtgagatatgg
atcagtagtcctagttctggagttggttattggaacaataaggaaataagccagaaaact
ttttgcaatcagcttaagaattatcctaacaaaaatttcacaagaactggtgatttagga
cggatcatcgctggtaaactttttattacaggtaggatcaaagatcttatcattgttgct
ggtagaaatatttattctgcagatgtagagaagacagtggaaggttcttccgatgttctt
cgaccaggctgttgtgctgttgttggtgttcctgaggaagttttaacccagaaaggcatc
tcaattcctgattcttctgaccaggttggacttgtcgtgatcgctgaggttagggagggt
aaagcagtctctgaagagattgtagataacatcaaaacacgtgtagcggaggagcatggt
gtaactattgcatctgtcaagcttatcaaacctagaaccatatccaagacaacatctggg
aaaatacggagattcgaatgcatgaaacagtttgttgataatactcttagcttggcaaat
agtaaccatatatctaagaagaagtctctttttcggtctctcactacaggaactggaatg
gaaattaggaggccctccttgaagcataccattgatcccacctttcgccctcagatcaga
agcaaagtgaaaaactccatgcagattattgagtttttaacacagttagtatcagatcaa
acaggcattccaaaggagaaaatttccccaactgacagcttaccttcttatggctttgac
tcgattgcagtggtccgagcagcacagaagctctcagattttcttgatacacctgttgga
gcaattgacatctttaccgcaagctgcatttcagagctcgctaagttcttggagaatctg
gtgcataagtcacaaccacagctggcacctcagcccagaggcaaagtgaagaagtcgaag
gagattattgaatttttgaaacagatagtatcagatcaaacaggcattccaaaggacaaa
atttcgccaactgacagtctaccttcttatggttttgattcaatcacagtggtccgagca
gcccagaaactctcagattttctcggtattcctgttggagccattgacatttttacagca
agctgtattgatgagcttgctaccttcttggagaatttggtacacaagtcacaaccacag
ttggaccctgatgaatcttgctccgctgaggatgagaatctagcgattatagataccagc
agttcagatctcagtgtgtttgctactgggaccctccagctcctggctcttacctatgta
tgttttatcctgttactcccagcatatctcgcaagttcaatgtacatgggcatgctatct
tcggtcagtctggtgaaattaccactgctgagctatcttagttctttggtcctggcaccc
attgcttggatatgttacgccttgttcacctcattatccctggctatcttggggaagtca
ttccttcagccaaattatgttctaacccctgatgtttcaatatggtcagttgactttgtg
aaatggtgggcactaagcaaggcgcaatcattagcagctaagatgctagctgtacatcta
aagggtacaatcttcttgaattactggttcaagatgcaaggagctcggattgggtcatct
gttgtcattgacacaatagatatcactgacccatccttgctagcagttgcagatggtgcc
gtgattgcagaaggtgttctaattctgggccatgaagtccgtaatgaagtgctgagtttt
aggcatgtcaagattggccagaaggcatcaatcagcccttatgctgtcctccagaagggc
accattgtgcccaatggtgttgtggttccaccgttgcaaaagaccgaacaagggaaatcg
acttgtctggctagcaaagcttctgcatacatgaaggaagaagcaaggatagcagacatg
gtatttgagcacctttttagcatctatgcagtaggcttcctgggtgctctgtcaagtgca
accgtcttcatgtcgtatagtcacttctctggcaccgcgacttcacttcagcacttctcc
tttgcatgtattgctggtgccttccactggttaccagctgtcattgctgcttatgctgtg
attgtccgcgagacgaccatgagcccagtgtcatctgctttcttcctcgccttcgcctac
ttgagttatgggatcatcctcagtcttctcaccagtatcaccaacaaagctcttgctaca
aggtcagggtccaagaagaaggatattgcaagtttgatccagcggcgcataatcatcgcc
gcgcacctcagatttgcaaagatgctatccggaacagaagccttctgcatgtacttgagg
cttctcggagcaaagattggcaggcattgctctatccgagccatcaatccagtggcaaat
cctgagctgatcagcgtcggtgatggggtccatctaggtgatttctgcaatattgttcca
gggttctactcaaaagggtttaccagtgcggagataaaggtccaggacaacactgtggtt
ggcagtggcagcttgctcctccctggctcagccctccaagagaatgtcatcctgggagca
ctctctgtggcaccacagggttcggttctccagcaaggcggcgtctatgtcggcgcacag
tctctaaccttggtgaagaacaccttgatcgcagaagatgagcggattgaagagatggac
ccgttgtacaagaagattgttgggaaccttgcggcaaacctggccatcaccaccatgaac
gtcaagtcaagatacttccaccgcattggcgtcagcgggcggggcgtcctgaggatgtac
caagacatcccttccctgcccaagcacaagatatttgacgccggcaagtctttcccggtg
atcatccggcacagtaacagcctcagcgcggacgacgacgccaggcttgacgcccgtggt
gcggcagtgcggatcctatcggacgacggcgaggtgcctcttcttgaccttaccctgaag
agcggcaaggcgttctacgcgcgcaccatcgcggacttcgccacctggctcgtctgcggc
ctgccggcgagggaggagcaggtgaagcaggcgccgcacatccgcgacgccgtctggggc
tccctgcggaacaccgactcgtacaccgtgctgcactactactccaacatctgccggctg
ctgcggttcgaggacggcaaggagatgtatgccaagttcaagcttcgcccggtggacaaa
gacgtgtcggaggactccggccaagtggtgccacggggcatcctaccgccggagactggc
gccatcccgagggacgccgacgacacgcgcccgctgctcttcctcgccgacgacttccgg
cgcaaggtggaggcccctgagggcgtgcgctacgtcttccagctgcagctcagggatgtc
ccagccgacagcgccgcccgcgacgccgccctcgactgcacacggccgtgggatgaggcc
gagttcccgtacattgaggtcggggaggtaagcctcagcagcaatgtcccgacggaggag
acggagaagctcgagttcaacccgttcctgcgatgcccggaggtggacgtgatcccggcg
acgtcgtgcacgcagagcgcgtccatcgaccacgggcgctcgctggtctacgagatctgc
caacgcctgcggaacggcgagccgctgccggcgtcgtggcgggcgttcctggaccagtca
gacaccaagatcgacctgtcaggctgcccggtcatggcggcgacgcgctcgagctcgaac
gtccgccatgccaccaccaaggtgacgctggcgaggacatggtaccaggcgctctgggcc
acgctgtgccagccactgctgcagacgctcgtgccgtacttcgccatgggcctggtcatc
ttcctgcccctccgtggcctcctcgccgtgtccacggccaccggcacgcctctgtactgg
tccctgcccatcttctgggtgacgtctggcgtcgccgcgatggccacctgcgctgtggcg
aagtgggccctggtcggctgcagggccgacggcgacacggtgcacatctgggcgctggcc
gtgttcctggacacggtctggcaggccgtgcgcacggccacggcggagtacttcgcggag
ctgacgcccgggtccgtgctgttcgcggcgtggatgcgggccatgggcgcgtccgtggcg
gcggccgacggtgtgtacgtggactccatgggcgtgctgctgaacccggagatggtacgt
ctggagcgcggcgcgagcgtggggcgggacgcgctgctgttcggccacgtctacgagggc
gagggtggggaggtgaagttcggcacggtgcacgtcggcgaggacggcttcgtgggcagc
cgcgccgtggcgatgccggacgtcagggtcgacgacggcggctgcctcggcgccctgggt
ctggccatgaaggaggagatcgtgaggaacaggatgtag

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