Panicum virgatum (switchgrass): 120680080
Help
Entry
120680080 CDS
T07260
Name
(RefSeq) trimethyltridecatetraene synthase-like
KO
K20623
typhasterol/6-deoxotyphasterol 2alpha-hydroxylase
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00905
Brassinosteroid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00905 Brassinosteroid biosynthesis
120680080
09180 Brite Hierarchies
09181 Protein families: metabolism
00199 Cytochrome P450 [BR:
pvir00199
]
120680080
Cytochrome P450 [BR:
pvir00199
]
Cytochrome P450, plant type
CYP92 family
120680080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
p450
Motif
Other DBs
NCBI-GeneID:
120680080
NCBI-ProteinID:
XP_039817659
LinkDB
All DBs
Position
2K:46805181..46807631
Genome browser
AA seq
522 aa
AA seq
DB search
MELPLPPWAPFLGVVLATVMLLKAVLGRRSRRAYNLPPGPKPWPIIGNLDLMGALPHRSI
HELSRKYGQLMQLRFGSFPVVVGSSVDMAKFFLKTHDVVFTDRPKTAAGKYTTYNYRDIT
WSPYGAYWRQARKMCLTELFSAKRLESYEYIRAAEVRALLRDLHAASGSGRAVMLKDYLS
TVSLNVITRMVLGKKYLDKEVAVAGGSSVTTPEEFKWMLDELFLLNGVLNIGDSIPWLDW
MDLQGYIRRMKKLSKMFDRFMEHVVEEHNQRRLREGKSFVAKDMVDVLLQIADDPTLEVE
LNRESVKAFTQDLIAGGTESSAVTVEWAISELLKKPEVIAKAPEELDRVIGRGRWVTEKD
IPQLPYVDAIVKETMRLHPVAPLLVPRLAREDATFAGYDIPAGTRVLVSVWSIGRDPALW
DSPEEFMPERFLGSKLDVKGQDYELLPFGSGRRMCPGYSLGLKVIQVSLANLLHGFAWSL
PDGVTKEELSMEEIFGLSTPRKFPLEAVVEPKLPAHLYAAEA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggagcttccacttccaccatgggcgcctttcctcggcgtggtgctggccaccgtgatg
cttctcaaggccgtcctcggccggcgcagccgccgcgcgtacaacctcccgccggggccc
aagccgtggccgatcatcggcaacctcgacctgatgggcgcgctcccgcaccgctccatc
cacgagctctccaggaagtacggccagctgatgcagctccggttcgggtccttccccgtg
gtcgtcggctcgtcggtggacatggccaagttcttcctcaagacccacgacgtggtgttc
acggaccggcccaagaccgccgccggcaagtacaccacctacaactaccgggacatcacc
tggtccccctacggcgcctactggcggcaggcgcgcaagatgtgcctcaccgagctcttc
agcgccaagcgtctcgagtcgtacgagtacatccgcgccgccgaggtgcgcgcgctgctg
cgcgacctgcacgccgcgtctggctccggccgcgccgtcatgctcaaggactacctgtcc
acggtgagcctgaacgtgatcacgcgcatggtgctcggcaagaagtacctggacaaggag
gtggcggtggccggcggatcctccgtgaccacgccggaggagttcaagtggatgctcgac
gagctgttcctgctcaacggcgtgctcaacatcggcgactccatcccgtggctcgactgg
atggacctgcaggggtacatcaggaggatgaagaagctcagcaagatgttcgaccggttc
atggagcacgtcgtggaggagcacaaccagcggcggctgcgcgaggggaagagcttcgtc
gccaaggacatggtcgacgtgctgcttcagatcgccgacgaccctaccctggaggttgag
ctgaacagggaaagcgtcaaggctttcactcaggatctcatcgccggcggaacagagagc
tcggcagtcaccgtcgagtgggccatctcggagctcctgaagaagcccgaagtcatcgcc
aaggccccggaggagctggaccgcgtcatcggccgcggccgctgggtcacggagaaggac
attccccagctcccatacgtggacgccatcgtcaaggagaccatgcggctgcacccggtg
gcgccgctgctggtgccccgccttgcgcgcgaggatgccaccttcgccggctacgacatc
cccgccggcacgcgcgtgctcgtcagcgtctggtccatcggccgcgaccccgcgctgtgg
gactcgccggaggagttcatgccggagaggtttctgggcagcaagctcgacgtgaagggg
caagactacgagctgctgccgttcgggtcgggccggcggatgtgccccggctacagcctc
ggcctgaaggtgatccaggtgagcctcgccaacctgctgcacggcttcgcgtggagcctc
cccgacggcgtgaccaaggaggagctgagcatggaggagatcttcggcctgtccacgccg
cgcaagttccctctcgaggccgtcgtcgagcccaagctgccggcacatctctacgccgcc
gaggcttga
DBGET
integrated database retrieval system
