Panicum virgatum (switchgrass): 120680108
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Entry
120680108 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit C-2-like
KO
K08066
nuclear transcription factor Y, gamma
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120680108
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120680108
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
Thi_PPkinase_C
Motif
Other DBs
NCBI-GeneID:
120680108
NCBI-ProteinID:
XP_039817670
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All DBs
Position
6N:complement(11832275..11833700)
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AA seq
330 aa
AA seq
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MDQYSQEINNDDGATSGVTPGSYPLNTFLQPAALESVPLLSATAAFLPVPASQGAAAYPA
TILSSFSNQQSSQTNAFEAATNVAGGTPAAFALTPYNHQPEALASLPPSSSAGTTRLPSA
AGSSSSQVAGAGAAYQASIPVPLSSQHQAALFQKFQQLQQHQLQYQEQQLQALWTGQLVE
AEQATDLKVHNLPLARIKKIMKADEDVKMIAGEVPVLFAKACEMFILELTLRSWLHAEGA
KRRTLQRSDVASAIIANEMFDFLMDVSPTEEQNGNGVAPPQQTATMPPATFPIPFPMYAN
QQPVTFMWPPTEYQQPQQRQQQNSDGGQAE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatactcacaggagatcaacaatgatgatggtgccacaagtggtgttacccct
ggatcatatcctctaaacacattcctacagcctgcagcattggaatcagtgcctctgttg
tcagccaccgccgccttccttccagttccagcttcccaaggcgctgcagcctacccagcc
accattctgtcgtcgttctcgaaccagcaatcgtcacagactaacgcttttgaagcagct
acaaatgttgctggtggtacccctgcagcatttgccctaacaccatacaatcaccaacct
gaagcattggcgtcattgcctccgtcgtcatcagctggcaccaccagacttccatcagct
gcaggctcgagctcgtcccaggttgccggtgccggtgctgcctaccaagcttccatccca
gtgccgctgtcgagccagcaccaggccgcgttgttccagaagttccagcagctccagcag
caccagctgcagtaccaggagcagcagctccaggctctgtggacgggccagctggtcgag
gccgagcaggctacggacctcaaggtccacaacctgcccctggcgcggatcaagaagatc
atgaaggccgacgaggacgtcaagatgatcgccggcgaggtgcccgtgctcttcgccaag
gcctgcgagatgttcatcctggagctcacgctgcggtcgtggctccacgccgagggggcc
aagcgccggacgctgcagcggagcgacgtcgcctcggcgatcatcgccaacgagatgttt
gatttcctgatggatgtctctccgacggaggagcagaatgggaatggagttgcgccgccg
cagcagaccgcaaccatgccgccggcgaccttcccgatcccctttccgatgtatgcaaac
cagcagcctgtgacgttcatgtggccgccgacggagtaccagcagccgcagcagcgccaa
caacagaattctgatggtggacaagccgagtaa
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