Panicum virgatum (switchgrass): 120680113
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Entry
120680113 CDS
T07260
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B
KO
K03064
26S proteasome regulatory subunit T4
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120680113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120680113
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
120680113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
RuvB_N
AAA_5
PRS7_OB
AAA_22
nSTAND3
DUF815
TIP49
Prot_ATP_ID_OB_N
AAA_7
AAA_14
Parvo_NS1
RNA_helicase
Mg_chelatase
AAA_33
Sec8_N
Sigma54_activat
AAA_3
NACHT
AAA_18
AAA_28
IstB_IS21
AAA_24
NPHP3_N
TsaE
bpMoxR
ABC_tran
AAA_lid_PRS2_C
ATPase
AAA_11
eIF-1a
ATPase_2
PhoH
AAA_25
ResIII
Motif
Other DBs
NCBI-GeneID:
120680113
NCBI-ProteinID:
XP_039817699
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All DBs
Position
1K:complement(8537159..8541901)
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AA seq
400 aa
AA seq
DB search
MADGEDAAAARRRSAITDYRKKLLNCRELESRVGTVRESLKNAKKDFAKTEDDLKSLQSV
GQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPR
EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY
GPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD
EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPG
RLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMA
AIRAERDYVVHEDFMKAVRKLNDAKKLESSAHYSADFGKE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggggaggacgccgccgccgcgcgccgccggtcagccatcaccgactaccgg
aagaagctgctcaactgcagggagctcgagtcgcgcgtcggcaccgtgagagaaagccta
aaaaatgcaaagaaggactttgccaagactgaagacgacttgaaatcgctgcaaagcgtg
ggtcaaataattggagaggtcctccggcctctagataatgaacgtttcattgtgaaggcc
agcagtggtccccgatatgtggttggttgccgaagtaaagtggacaaggagaagttgact
tctggaactcgtgttgtacttgacatgacgaccttgacaataatgcgcactctaccacgg
gaggttgatcctgtggtatacaacatgcttcatgaagaccctggaaatgtcagttactct
gctgtaggcggtttgtctgatcagattagagaactcagggagtccattgagttaccgctt
atgaaccctgaactctttcttcgggtgggaattaagcctcctaagggcgtcctactctac
ggtcctccagggactgggaagacactattggcgagggctatcgccagtaacatcgatgcc
aactttttgaagattgtttcaagtgctattattgacaagtacattggagaaagtgctcgt
ttgattagagaaatgtttggctatgcacgagatcaccaaccatgcatcatcttcatggat
gaaattgatgccattggtgggcgaaggtttagtgagggaactagtgctgatcgtgagatc
cagcggacgttgatggagctccttaaccagctagacggatttgatgagcttgggaaggtt
aagatgatcatggctacgaaccgacctgatgttttggacccagccctcctgcgtcctgga
cgtttagacaggaagattgagattccactacccaacgagcaggcgagaatggaagttctt
aaaattcatgctgctggtattgccaaacatggggaaattgattacgaagctgtcgtgaag
cttgcagaaggtttcaacggggctgatcttcggaatgtctgcaccgaagctggtatggct
gcaattcgggcagaaagggactatgtggtccatgaagacttcatgaaggctgtgcgcaag
ctgaatgatgcaaagaagctggaatcgagtgctcactacagcgcagactttgggaaagag
tag
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integrated database retrieval system
