Panicum virgatum (switchgrass): 120680454
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Entry
120680454 CDS
T07260
Name
(RefSeq) protein FORGETTER 1-like
KO
K26273
protein strawberry notch
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120680454
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120680454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Zn_ribbon_FGT1_1
Zn_ribbon_FGT1_2
SBNO
ResIII
PHD
HVO_2753_ZBP
zf-PHD-like
IBR_1
DUF7560
PHD_4
Motif
Other DBs
NCBI-GeneID:
120680454
NCBI-ProteinID:
XP_039817883
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All DBs
Position
7N:complement(44969748..44995396)
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AA seq
1302 aa
AA seq
DB search
MAGGSSPSPATAPVQVRCAGCRDVLAVGSGMTEFICPKCRMAQRLPPQLMPKSTSSSSSS
PPPKSPAKPSLPPPTQPRRGAPPAQGVDPTKIQLPCAHCQAVLNVPHGLARFRCPQCGVD
LAVDHAKLQNFLASSNSAPPSGLTPASGPTTQAPPMPFVPILPPGVAQPLQLVAGATIPI
VLPAEVPEEINEVAIDVEREEDEGGTVGETFTDYRPPKLSLGLPHPDPVVETSSLSAVQP
PEPTYNLNIMAELDETKALSCLQIETIVYACQRHLHHLPTGDRAGFFIGDGAGVGKGRTI
AGLIWENWQQGRHKAVWVSVGSDLKYDARRDLDDVGAKCVQVHPLNKLPYSKLDSKAIGI
KNGVIFVTYSSLIASSERGRSRLQQLVQWCGHEFDGLLVFDECHKAKNLIPDAGSQPTRT
GKAVLEIQEKLPEARVVYCSATGASEPRNLGYMVRLGLWGEGTSFHNFPQFLGALEKGGV
GALELVAMDMKARGMYVCRTLSYKGADFDIVGASLEERMTNMYRKATEFWAELRLELLSA
SEFFAEEKGNSNQIWRLYWASHQRFFRHMCMSAKVPAVVRLAKEALAENKCVVIGLQSTG
EARTEEAVTKYGVEMEDFVSGPRELLLKLVEENYPLPPKPDSFQQGEEKVTEIQRKRHSA
PDVSFKGRVRKIAKVVDVSDDDTDDYSPSESDHESTESDEEFHMCQICNTEEEESLLLHC
SGCSRHVHPSCLMPPWTGMMTDDWTCYTCKVVEDEEIEQDANVADFSKRYDAAVEKKLKI
LDIIRSLDLPNNPLDDIIDQLGGPDNVAEITGRRGMLIRASDGKGVVYQARNAKEVSMEM
INMHEKQQFMDGKKLIAIISEAGSAGVSLHADRRAKNQRRRVHITLELPWSADRAIQQFG
RTHRSNQTSAPQYRLLFTNLGGEKRFASIVAKRLESLGALTQGDRRAGPSLSAFNYDSNY
GKKALTMMYRGIMEQDSFPVVPPGCSDDEASIQAFIDEAKAALISVGIIRDAVVCNGKDG
GKLSGRIADSDMHDVARFLNRLLGLAPNIQNRLFDLFTSVLDVVLHNARIEGQLDSGIVD
IKAKSIEMKESPKTVHTDSLSGALTVLFTFTIDRGITWESAKAMLEERQKDGAGSSNDGF
YESRREWMGRRHFILALEGSTEGMYKIIRPAIGEALREMPSTELKSKYRKVSSIDKVSKG
WQEEYDASSKQCMHGSKCKIGSYCTVGRRLQEVNILGGLILPVWGTIEKALAKQVRQIHK
RIRVVRLVTTNDSPQRIVGLLIPNSAVQSVLTGLQWVQDIDG
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggctcgtccccatccccggccaccgcgcccgtacaggtgcgctgcgccggc
tgccgcgacgtcctcgcggtcggctccggcatgaccgagttcatctgccccaagtgccgc
atggcgcagcgcctcccgccgcagctcatgcccaagtccacctcgtcctcgtcctcgtcg
cctccgcccaaatctcccgcgaagccttctctccctcctcctacgcagccccggaggggc
gcgccgccggctcagggggtggaccccacgaagatccagctcccgtgcgcgcactgccag
gccgtcctcaacgtgccccacggcctcgcccgcttccgctgcccgcagtgcggcgtcgac
ctcgccgtggaccatgccaagctccagaacttccttgcctcctccaacagcgccccgcca
tcgggcctcaccccagcctcggggccaacgacgcaggcccctccgatgcccttcgtccca
atattgccgcctggcgtggcgcagccgctgcaactggtggctggcgcaacgattcctata
gtgctgccagctgaggtgcctgaggagatcaatgaggttgctattgacgtcgagcgcgaa
gaagatgaaggtggcacagttggagaaactttcactgactacaggcctccgaagctatca
cttggtctgcctcatccagatccagttgtagaaacttcttctttatcagctgtacaacct
cctgaaccgacttacaacttgaatatcatggctgaattggatgagacgaaggcgttgtct
tgtttgcagattgaaacaatagtttatgcttgtcagcggcaccttcatcatctccctact
ggtgatagagcaggttttttcattggtgatggggctggtgttggtaagggtcgaacaatt
gctggattgatctgggaaaattggcagcagggaagacataaggcagtgtgggtgtctgtt
ggttctgacctgaagtatgatgctcgaagagatttagatgatgttggtgcaaagtgtgtc
caagtgcaccctttaaataagttaccgtactcgaagctagattcgaaggccattgggatt
aagaatggggtaatctttgtaacttatagcagcttaatagcatcgtctgagagaggccgc
tcccgtttgcagcaattggttcaatggtgtggccatgagtttgatggtctcttagtgttt
gatgagtgccacaaggccaaaaatctgattcctgatgcagggagccagccgacacgcact
ggtaaagcagttcttgagatccaggaaaagttacctgaggctcgggttgtttactgctca
gcaactggtgcatcagaacctcgaaatttgggctatatggttcgacttggactttggggt
gaaggaacatcgtttcataattttccgcaatttttaggtgctcttgagaaaggtggggtg
ggagcccttgaacttgttgccatggacatgaaagctaggggtatgtatgtatgccgtact
ctaagttataagggggctgattttgatatcgtgggggcttcgcttgaggaaagaatgacg
aacatgtacagaaaggcgactgaattttgggctgaattgcgccttgagctcctatcagca
agtgaattctttgctgaagagaaaggcaattcaaatcaaatatggcggttgtattgggcc
agccatcagcgtttcttcaggcacatgtgcatgtcagcaaaggtacctgctgttgtgaga
ttagctaaggaggccttggcagagaacaaatgtgtggtgattggtcttcagagcactgga
gaagctcgaaccgaggaagctgtcaccaaatatggagttgaaatggaagattttgtctct
ggtcctcgggagcttctcttaaagcttgtagaagaaaactatcctttgcctccaaaacct
gattcttttcagcaaggtgaagaaaaagtcacagagatccagcgtaagcgccattctgca
ccggatgtatcatttaaagggcgagtaaggaaaatagcaaaagtggtagatgtgagtgat
gacgacaccgatgattattctccatctgaatcagatcatgaatcaacagaatctgatgag
gagttccacatgtgtcaaatctgcaatacagaggaggaagagagcctgttgcttcattgt
tctggttgttctcgacatgttcacccaagttgtctaatgccaccttggactgggatgatg
actgatgattggacatgctacacatgcaaggtagtagaagatgaggaaatagagcaagat
gccaatgtagctgatttttcaaagaggtatgacgctgcagtagagaagaagttgaagatt
ttggatataatacgttccttggatcttcctaataatcctctggatgatatcattgatcag
ctgggagggcctgacaatgtcgcagaaataacaggacgtcgtggcatgctaataagagct
tcagatggaaaaggcgtggtttatcaggcgcggaacgcgaaagaagtttcaatggagatg
attaatatgcacgaaaaacagcaatttatggatggtaaaaaactaattgcaattatatct
gaagcaggatcagctggcgtttctcttcatgctgatagaagggccaaaaatcagaggaga
agagtacacataacgcttgaactcccttggagcgcagaccgtgctatacagcagtttggg
agaacccatcgttctaatcaaacttctgcacctcaatataggctcctttttacaaatctt
ggcggtgaaaagaggtttgcatcaattgtggcaaaaaggctggagtctcttggtgctttg
acacaaggagatcgcagggctggaccttctttgagtgcttttaactatgatagtaattat
gggaaaaaggcgttaaccatgatgtataggggaataatggaacaggattcttttccagtt
gttcctccgggatgttctgatgatgaagctagcatccaagcattcatcgatgaagcaaaa
gctgctctaatatcagttggaattatcagggatgctgtcgtatgcaatggaaaagatgga
gggaagctttctggtcggattgcagattcagatatgcatgatgttgctcgctttcttaac
cgtcttttgggattggctccaaacattcagaataggttgtttgatctttttacaagtgta
cttgacgttgttcttcacaatgcacggatagaagggcaactagattctggaattgttgat
atcaaagctaagagtattgaaatgaaagaatcacccaagactgttcatactgatagctta
tctggtgctttgaccgtactatttactttcaccatcgatcggggaattacgtgggagtcg
gcaaaggcgatgcttgaggaaaggcagaaagatggtgctggttcatcaaatgatgggttt
tatgagtccagaagggaatggatggggagaagacacttcattctagctttagaaggctca
actgaaggaatgtacaaaataatccggcctgctattggtgaagccttaagggagatgcct
tcaactgaactgaaaagcaagtacaggaaggtgtcatcaatagacaaagttagtaaagga
tggcaggaagagtatgatgcttcatcgaagcagtgtatgcatggatctaaatgtaaaatt
gggagctattgtaccgtaggtagaaggttgcaagaggttaatatattgggtggcctcata
cttccagtttggggtacaatagagaaggctctagccaagcaggttcgtcagattcacaag
agaatacgtgttgtccgtttagtcacaacaaatgacagtccccaacgaattgttggactg
ctgattccaaattcagcagttcaatcggtactaacagggttgcaatgggtccaggatatt
gatggttga
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