Panicum virgatum (switchgrass): 120680508
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Entry
120680508 CDS
T07260
Name
(RefSeq) recQ-mediated genome instability protein 2-like
KO
K15365
RecQ-mediated genome instability protein 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120680508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120680508
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
120680508
FA (Fanconi anemia) pathway
120680508
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMI2
Motif
Other DBs
NCBI-GeneID:
120680508
NCBI-ProteinID:
XP_039817935
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Position
7N:complement(42571002..42573196)
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AA seq
147 aa
AA seq
DB search
MDYTLAALKIFGSQLAGSTEAPSSEGSSPSQMLFGIRFQRAWMQGVLLSANYNESDEGRL
VLDDGSCVAELFVLPKEAEGRRWLAGMYVMVIGAYIAEQSKDNYPAIKVHKMVELSDQPD
REAMWYMEVAEAYNLFYLPFSVASPPS
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atggactacacgctcgcggcgctgaagatcttcggctcccagctcgccggctccaccgag
gcgccgtcctcggagggctcctccccctcgcagatgctgttcggcatccgcttccagcgc
gcctggatgcagggtgtgctcctgtcggcgaactacaacgaatccgacgaagggcgtctt
gtgctggatgatggctcctgcgtcgccgagctcttcgtcttgcccaaagaagccgagggc
cgacggtggctggcagggatgtatgtaatggttatcggggcctacattgcagaacagtct
aaggacaattatccagctatcaaggtgcataagatggtcgaactctctgaccagccggac
cgtgaagcaatgtggtacatggaagtagctgaggcgtacaacttgttctacctgccattc
tcggttgctagtcccccttcatga
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