Panicum virgatum (switchgrass): 120680606
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Entry
120680606 CDS
T07260
Name
(RefSeq) formate--tetrahydrofolate ligase-like
KO
K01938
formate--tetrahydrofolate ligase [EC:
6.3.4.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00670
One carbon pool by folate
pvir01100
Metabolic pathways
pvir01200
Carbon metabolism
pvir01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120680606
Enzymes [BR:
pvir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.3 formate---tetrahydrofolate ligase
120680606
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Motif
Pfam:
FTHFS
CbiA
Motif
Other DBs
NCBI-GeneID:
120680606
NCBI-ProteinID:
XP_039818041
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Position
2K:47150160..47154486
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AA seq
723 aa
AA seq
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MDLPAPPTNYPKTLTSIILRRRRPGARAATRREATNNSASPIVSPSSVHAHHSLLQPAPP
GPGRDRVVARSSAVVAQPPLPPPLLLPEMPSPTIRRLDVASPVPADIDIANSVEPLSIVD
IAAELGLGPEHYDLYGKYKAKVLLSVLDDLKEQQDGYYVVVGGITPTPLGEGKSTTTVGL
CQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAAN
NLLAAAIDTRIFHENSQSDKALFNRLCPANKEGKRRFADVMLKRLAKLGISKTDPNELTP
DEVRRFARLDIDPGSITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVASEIMAV
LALTTSLADMRERLGRMVIGNSKSGEPITADDLGVGGALTVLMKDAIHPTLMQTLEGTPV
LVHAGPFANIAHGNSSIVADKIALKLVGKGGFVVTEAGFGADIGTEKFMDIKCRYSGLVP
QCAIIVATIRALKMHGGGPDVVAGKPLDHAYVSENVALVEAGCVNLAKHIANTRSYGVNV
VVAINKFASDTEAEMNAVRNASMAAGAFDAVVCTHHAHGGKGAVELGLAVQRACESQSEP
LKFLYPLESSIKEKIESIAKFYGASGVEYSEQAEKQIEMYTKQGFSNLPICMAKTQYSFS
HVPSMKGAPTGFALPIRDVRVSIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVM
GLS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatctacctgccccaccaaccaattatcccaaaactttaacctccattatcctacgc
cgccgccgtcctggcgcgagggcggcgacgaggcgggaggcaacaaacaattccgccagc
ccaatcgtgtcgccgtcatcagttcacgcccaccactcgctgctgcagcccgccccgccc
ggacccggccgcgaccgagtcgtcgcgagatccagcgccgtcgtcgcgcaaccgccgctg
ccgccgccgctgctgctgccggagatgccgagcccgacgatccggaggctggacgttgcg
tcgccggtgccggcggacatcgacatcgccaattccgtcgagccgctctcgatcgtcgac
atcgcggcagagctcggcctcgggcccgagcactacgacctctacggcaagtacaaggcc
aaggtgttgctgtcggttcttgatgacctcaaggagcagcaggatgggtactacgtcgtt
gtgggcggcatcacgccgacaccgctcggggagggcaagtccaccactaccgtcggcctg
tgccaggctctgggcgcattccttgataaaaaggttgtcacttgtctccgtcaaccatca
caagggcctacctttggaatcaagggaggtgcagctggaggtggctatagccaagttata
cccatggatgagttcaaccttcatctgacaggcgatatccatgcaattacagctgcaaac
aatctcttggctgctgctattgatacaaggatcttccatgaaaattctcagtcagacaag
gcactgttcaacagattatgtccagcaaacaaagaaggcaagaggcgctttgctgacgta
atgctcaaacgtctggcaaagcttggtatttcgaagacagatcccaatgagcttacacca
gatgaagttagacgttttgcaaggcttgacattgaccctgggtcaattacatggcgacgg
gtgatggatgtcaacgatcgtttcctgaggaaaatcactattggacagggccctgaagaa
aaaggaatggtgagagaaacaggctttgacatatcagttgctagtgagataatggctgtg
ttagctcttacaacttcccttgccgacatgagagaaagacttggaagaatggtgataggg
aacagcaagtcaggagagccaattactgctgatgatcttggtgttggaggtgccttaact
gtcctaatgaaagatgcaattcatcccaccctcatgcaaactcttgaaggcacaccagtt
ttagttcatgctggaccatttgctaacattgctcatggaaactcatcgatagttgctgat
aagatagctttaaagctggttggtaagggtggttttgttgtaactgaggcaggttttggt
gctgatattggaactgagaagttcatggatataaagtgtagatacagtggattggtgcca
cagtgcgctattattgtggccacaattagagctcttaaaatgcatggtggggggcccgat
gttgtggctggaaagcctctggatcatgcatatgtgagtgaaaatgtagcccttgttgaa
gctgggtgtgtcaaccttgctaaacatatagcaaacacaaggagttatggagttaatgtt
gtagtcgcaatcaacaaatttgcatcagatactgaagcagaaatgaacgcagtgcggaat
gcatctatggctgctggagcctttgatgctgtcgtctgcacacaccatgcccatggtggt
aaaggagcggttgaacttggactcgcagttcaacgagcatgtgaaagccagtcagagcct
ctgaagtttctgtatcctttggaatctagcataaaggagaagatcgaatccatagctaag
ttctatggtgctagtggcgtcgaatattctgaacaggctgagaagcagattgagatgtac
accaagcaaggcttctccaacctcccaatctgcatggcgaaaacccagtactcgttctca
catgttccctccatgaagggcgcccctaccggcttcgctctaccaataagggacgtgagg
gtcagcatcggagctgggttcatctacccgctcgtgggcaccatgagcacaatgcccggc
cttccaacaaggccctgcttttacgagatcgacgtcgacactgccaccgggaaggtcatg
ggcctgtcgtaa
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