Panicum virgatum (switchgrass): 120680648
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Entry
120680648 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 12-like isoform X1
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120680648
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120680648
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120680648
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120680648
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120680648
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_7
PK_Tyr_Ser-Thr
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF_EFCAB10_C
AIF-1
EF-hand_9
EFhand_Ca_insen
EH
Kdo
SPARC_Ca_bdg
SPEF2_C
Kinase-like
EF-hand_11
Gp-FAR-1
DUF5580_M
GAD
Motif
Other DBs
NCBI-GeneID:
120680648
NCBI-ProteinID:
XP_039818086
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Position
7N:complement(41020722..41023604)
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AA seq
557 aa
AA seq
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MGNCFTKTYEHEIPITVEPPPPPRWRPSSQPQYRPPHEHKTRDVPLSSGSRWPSDARGQT
LPRPRPPPSRPAFPSSGAGSMMGRRASSGREVGPVLQRPMVDVRTLFHLERKLGSGQFGT
TYLCTERATGLKYACKSVSKRKLVRRADVEDMRREITILQHLSGQPNVAEFKGAFEDADA
VHLVMELCTGGELFDRITAKGSYSERQAAAVCRDVLTVVHVCHFMGVMHRDLKPENFLLA
SPADDAPLKAIDFGLSVFIEEGKVYKDIVGSAYYVAPEVLRRNYGKEIDVWSAGVILYIL
LCGSPPFWAETEKGIFDAILVGQLDLSSTPWPSISESAKDLIWKMLNRDPQKRITAAQAL
QHPWLKDAPDRPIHSAVLSRMKQFKAMNKLKQLALKVIAENLSPEEIKGLKQMFNNMDTD
KSGTITVEELKEGLTKLGSKISEAEVQKLMEAVDVDKSGSIDYTEFLTAMMNKHKLEKEE
DLIRAFQYFDKDNSGYITRDELEQAMAEYGMGDEASIKQVLDEVDKDKVRIFFRLTNSIC
IDLIITPTEFTGWEYRL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactgcttcaccaagacgtacgagcacgagatacccatcaccgtggagccgccg
ccgccgccgcggtggcggccgtcgtcgcagccgcagtaccggccgccccatgagcacaag
acgcgggacgtgccgctgtcctcgggctcgcgctggccgtccgacgcccgggggcagacg
ctgccgcggccgcggccgccgccgtcccggccggccttcccgtcgtcgggcgcggggtcg
atgatgggccggcgggcgtcctccggccgcgaggtgggcccggtgctgcagcggccgatg
gtggacgtgcggacgctgttccacctggagcggaagctggggagcgggcagttcgggacg
acgtacctgtgcacggagcgcgcgacggggctcaagtacgcgtgcaagtccgtgtccaag
cgcaagctggtgcgccgcgccgacgtggaggacatgcgccgggagatcaccatcctgcag
cacctcagcgggcagcccaacgtggcggagttcaagggcgccttcgaggacgccgacgcc
gtgcacctcgtcatggagctctgcaccggcggcgagctcttcgaccgcatcacggccaag
ggcagctactccgagcgccaggccgccgccgtctgccgcgacgtcctcaccgtcgtccac
gtctgccacttcatgggggtcatgcaccgcgacctcaagcccgagaacttcctgctcgcc
agccccgccgacgacgcgccgctcaaggccatcgacttcggcctctccgtcttcatcgag
gaaggtaaagtttacaaggacattgtggggagtgcatactacgtggcgccagaggtactg
cgccggaattacggcaaagaaattgatgtgtggagcgccggagtgatcttatacattctt
ctgtgtgggtcaccgcctttctgggcagaaacagagaagggcatatttgacgctatactg
gtcggccagcttgatttgagctccaccccgtggccctccatatctgaaagtgcaaaggat
ctcatttggaaaatgttgaacagagatcctcagaagcgaattactgcagcacaggcccta
cagcatccgtggctcaaagatgcaccagacagacctatccatagcgcggtcctgtcaaga
atgaagcaattcaaggcaatgaacaagctaaagcaactagcgctcaaggtaatcgcggag
aacctatcgccagaggagataaagggattgaagcagatgttcaataacatggatacagac
aagagtggcacgatcacagttgaagaactgaaggaaggactgacaaagcttggatcgaag
attagtgaagcagaagttcagaagcttatggaagcagttgacgtggacaagagtggcagc
attgattacacagagttccttactgccatgatgaataaacataaattggaaaaggaggag
gatttaatccgtgcatttcaatactttgacaaagataacagcgggtacataacaagagac
gaactggaacaagccatggcagagtatggaatgggtgatgaagcaagcattaaacaagta
ctagacgaagttgataaagacaaggtaagaatattcttccgactaaccaattccatttgc
atagatttaatcatcacccccactgaattcacaggatgggaatatcgactatga
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