Panicum virgatum (switchgrass): 120680691
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Entry
120680691 CDS
T07260
Name
(RefSeq) protein indeterminate-domain 14-like
KO
K25871
zinc finger protein IDD14/15/16
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120680691
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120680691
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Paralog
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2_6
zf-C2H2
zf-C2H2_4
zf-met
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
120680691
NCBI-ProteinID:
XP_039818138
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Position
2K:47395577..47398761
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AA seq
496 aa
AA seq
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MLGFCAPAAGSPPDDATPEPFRSLQIAATAAATTKKKRRPAGTPDPDAEVVSLSPRTLLE
SDRYVCEICGQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKRVFVCPEPSCLHHDPAH
ALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTCGTRGHSCDCGRVFSRV
ESFIEHQDTCTAGRPRADASPACGGGGVGVAAASAGSQRQAPPPALSLSRTASSTSPSSD
VVISPAAWPGPPPPLPSPTAAAFHGRFDRVPSPRTPPSEHHRGGRTHNLELQLMPPSSSV
AGGGVPGTVAFCGAQSSPGGVSSRGDAAAAMQLQLSIGVCGGGSWDAGERGSEALDAAAR
ARQEEEARDLLRQAVAEKAAADEARAQARRHAELAEQELASAKRMRRQAQVELSRAHALR
EHAVRQVNATLLQITCLGCRHKFRARPAPPPDVVCSYVSSVVTEGGDAEVDEPPPLDAGG
GAMRRRQHAMAMDIVL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcttctgcgctcccgcggccgggtcccctccggacgacgccacgccggagccg
ttccgctcgctgcagatcgccgccacggccgccgccacgacgaagaagaagcgccggcca
gccggcacaccagacccggacgcggaggtggtgtcgctgtcgccgcggacgctgctggag
tcggaccggtacgtgtgcgagatctgcgggcaggggttccagcgcgaccagaacctgcag
atgcaccggcggcgtcacaaggtgccgtggaagctgctgaagcgggaggccggggaggcg
gcgcggaagcgggtgttcgtgtgcccggagccgagctgcctgcaccacgaccccgcccac
gcgctgggcgacctcgtcggcatcaagaagcacttccgccgcaagcacagcggccaccgc
cagtgggcctgcgcccgctgctccaaggcctacgccgtccactccgactacaaggcccac
ctcaagacctgcggcacccgcggccactcctgcgactgcggccgcgtcttctcccgggtg
gagagcttcatcgagcaccaggacacctgcaccgccgggcggccacgggcggacgcctcg
ccggcgtgtggaggcggcggcgtgggcgtggctgctgctagtgccgggtcgcagcggcag
gcgccgccgccggccctgtcgctgtcacgaacagcgtcgagcaccagcccgtcaagcgac
gtcgtcatcagcccggcggcctggccgggtccgcctccgccgttgccgagccctacggcc
gccgcgttccacggccggttcgatcgcgtcccgtcgccgcggacgccaccgtcggagcac
caccgcggcggtcgcacgcacaacctcgagctgcagctcatgccgccctccagcagcgtc
gcgggcggtggtgtgccgggaaccgtggcgttctgcggcgcgcagagttcgcctggcggc
gtttcctcgcggggcgacgccgccgccgccatgcagctgcagctgtccatcggcgtctgc
ggcggcgggtcctgggacgcgggcgagcgcggcagcgaggcgctggacgccgcggcgagg
gcgaggcaggaggaggaggcgcgggatctgctgcggcaggcggtggcggagaaggcggcg
gcggacgaggcccgcgcgcaggcgaggcggcacgcggagctggcggagcaggagctggcg
agcgccaagcggatgcggcggcaggcgcaggtggagctgagccgcgcgcacgcgctccgc
gagcacgccgtgcgccaggtcaacgcgacgctgctccagatcacgtgcctcggctgccgc
cacaagttccgcgcgcggccggcgccgccccccgacgtcgtctgcagctacgtctcctcc
gtcgtgaccgagggcggcgacgccgaggtcgacgagccgccgcccctggacgccggcggc
ggcgccatgcggcggcgccagcacgccatggccatggacatcgtcctctag
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