Panicum virgatum (switchgrass): 120680710
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Entry
120680710 CDS
T07260
Name
(RefSeq) transcription factor ILI1
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120680710
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120680710
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Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
Cep57_CLD_2
GemA
FliJ
DASH_Hsk3
DUF883
Spo16_C
DUF948
Motif
Other DBs
NCBI-GeneID:
120680710
NCBI-ProteinID:
XP_039818161
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Position
7N:complement(47383348..47384632)
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AA seq
102 aa
AA seq
DB search
MSSSRRSRTRRAGSSLSSSSSSRSISEDQISELLSKLQALLPESQTRNGAHRGSAARVLQ
DTCSYIRSLHQEVDNLSETLAELLSSADVTSDQAAIIRSLLM
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcagccgcaggtcacgcacgcggcgtgcggggagctcgctgtcgtcgtcgtcg
tcgtcgaggtccatctcggaggaccagatctcggagctcctgtccaagcttcaggcgctg
ctcccagagtctcaaactcgcaatggcgcgcataggggctcggcggcgagggtgctgcag
gatacatgcagctacatcaggagcctgcaccaggaggtggacaacctcagcgagacgctc
gccgagctgctctcctccgccgacgtcaccagcgaccaggccgccatcatcaggagcctc
ctcatgtga
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