Panicum virgatum (switchgrass): 120680754
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Entry
120680754 CDS
T07260
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 homolog A-like
KO
K03032
26S proteasome regulatory subunit N2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120680754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120680754
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
120680754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
DUF4786
Motif
Other DBs
NCBI-GeneID:
120680754
NCBI-ProteinID:
XP_039818212
LinkDB
All DBs
Position
7N:complement(44844978..44854960)
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AA seq
1007 aa
AA seq
DB search
MAAVATVSSASGLLAMLQEPAPELKLHALASLNSVVHLFWPEISTSVPTIESLYEDEEFD
QRQLAALVVSKVFYYLGELNDSLSYALGAGPLFDVSDDSDYAHALLAKALDEYASIKTRA
SKATEEEENIDPRLEAIVERMLEKCILDGKYQQAMGMAIECRRLDKLEEAIVRCDNIQGA
LSYCINLSHQYVNHREYRFEVLRCLVKIYQTLPNPDYLSICQCLMFLGEPETVASILDKL
LSGSKEDALLAYQIAFDLVENENQAFLLNVRNRLASPTPVPSNPDTGSALQDDQAASMGT
GTETAGDVQMRDDTATPNGNVHTVDPNEIAHANRLAKIKGILSGETSIQLTLQFLYSHNR
SDLVILKTIKQAVEMRNSVCHSATICANAIMHAGTTVDTFLRENLEWLSRATNWAKFSAT
AGLGVIHRGHLQQGRALMAPYLPQSGAVGGGSPYSEGGALYALGLIHANHGEGIKQFLRE
SLRNTSAEVIQHGACLGLGLAALGTADEEIYEDIKNVLYTDSAVAGEAAGIGMGLLMVGT
ASEKASEMLAYAHDTQHEKIIRGLSLGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY
ALALAYRGTANNKAIHQLLHFAVSDVSDDVRRTAVMALGFVLYNEPEQTPRIVSLLSESY
NPHVRYGAALAVGISCAGTGLSDAISLLEPLTSDVVDFVRQGALIAMAMVMIQTNESFDS
RVGAFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIKLLSRNKHDKLTAVVGLA
VFSQFWYWYPLLYFISLAFSPTAFIGLNSDLKVPKFEFLSHAKPSLFEYPKPTTQQTTTS
TVKLPTAILSTYAKAKSRAKKDAESKANQEKATEEASGSSSGKTAKSQEKDADAMQVDNA
AEKKAPEPEPTFQLLTNPARVIPAQEKFIRFIESSRYVPVKPAPSGFILLRDLQPTEAED
LALTDAPSTVAATTGNTAAAAGQQGSGSSAMAVDEEPQPPQPFEYTS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggctacggtgagctccgccagcgggctcctcgcgatgctgcaggagccg
gcgccggagctgaagctgcacgcgctcgccagcctcaactccgtcgtccatctcttctgg
cccgagatctccaccagcgtccccaccattgagagcttgtatgaagatgaggagtttgat
cagaggcagcttgcagcactagttgtttctaaggtattttactacctgggcgagttaaat
gattcactgtcatatgcacttggtgctggacccctttttgatgtttccgacgattctgat
tatgctcatgctcttttagccaaagcattagacgagtatgccagtatcaagaccagagcc
tctaaagctacagaggaggaagagaacattgatcctcgattggaggccatagtggagagg
atgcttgaaaagtgtatccttgatggaaaatatcaacaggccatgggtatggctattgaa
tgcaggaggctggataagctggaggaagcaattgttcggtgtgataatattcaaggggct
ctatcgtattgcatcaacctttctcatcaatatgttaatcaccgtgaatatcgctttgag
gttctccgttgtcttgttaaaatataccaaactttgccaaatccagattatctgagcatt
tgccagtgtctgatgtttttaggtgagccagaaaccgtcgcaagcatattggacaagctg
ctttctggaagcaaggaggatgctcttctcgcgtatcaaattgcattcgatcttgttgag
aatgaaaaccaggccttccttttgaatgtgagaaatcgtctggcctcgccgactcctgtg
ccatctaaccctgacactgggtcagctttacaagatgatcaagctgctagtatgggtaca
ggcacagaaacagctggagatgttcagatgagagacgacacagctacaccgaatggaaat
gttcacactgtggatccgaatgagatagcacacgccaacaggcttgcaaaaattaaagga
atactatcaggggagacttctattcagctgacactgcaatttctatacagtcacaatagg
tccgatcttgtaattctgaaaacaataaaacaggctgtggaaatgaggaacagtgtttgc
cacagtgcaactatatgtgccaatgcaatcatgcatgcaggaactactgtagataccttc
ctaagagaaaacctggagtggttaagcagagcaaccaattgggcgaaattcagtgcaact
gctggactaggtgtcattcatagaggccaccttcaacagggccgggctttgatggccccc
tacctacctcaaagtggtgcagttggtggtggcagtccatattcagaaggtggtgccctg
tatgcgttaggtctgattcatgccaatcatggtgaaggaatcaaacagtttctccgtgaa
agtcttcgcaacaccagtgctgaggtcatccaacatggtgcatgtttgggacttgggctt
gcagctttgggaactgcagatgaggagatatacgaggacataaagaatgtcctttacaca
gacagtgctgtggctggtgaggcagctggtattggcatgggcttgctcatggttgggacc
gccagtgagaaggctagtgaaatgcttgcttatgcacatgatacccaacatgaaaagatt
ataaggggtttgtctctgggcattgcattgacagtatatggcagggaagaagaagcagac
accttgattgaacaaatgactagagatcaagatcccatactacgttatggtggtatgtat
gcattggctctagcctacaggggaactgcaaacaacaaagctatccaccagctgttacat
tttgctgtatcggatgtcagtgatgatgttcggaggaccgcagttatggctcttggattt
gttctatacaatgaacccgagcagactccaagaattgtgtccctgctctctgaatcgtac
aacccacatgttcgttatggtgcagccttagctgttgggatatcttgtgcaggaaccgga
ttaagtgatgcgatctccttgctagagcctcttacatcagatgttgttgacttcgtgcgc
cagggagctctcattgctatggctatggtaatgatccagaccaatgagtccttcgattct
cgtgttggagcattcaggcgtcagctggaaaagatcattcttgacaagcatgaggacacc
atgagcaaaatgggtgccatactagcttctggtattcttgatgctggtggtaggaatgtc
acaatcaagctcctctcaaggaacaaacatgacaaactcactgctgtggttggtctcgct
gttttcagtcagttctggtactggtatcctctcttatatttcatcagcctggccttctca
ccaacagccttcattgggctcaactctgatctgaaagtgccgaagtttgagttcttgtca
catgctaaaccatccctttttgagtatcccaagccgacaactcagcagactacaacttca
accgtgaagctgccaacagctattttgtcaacttacgccaaggcaaaatctagggcaaag
aaagatgcagaaagcaaagctaaccaggagaaggccacggaagaggcttctggttcttct
tcaggcaagacggctaaaagtcaggagaaggatgctgatgcgatgcaggttgataacgct
gcggagaagaaggcccctgaacccgagccaaccttccagctcctgacaaacccagctcgt
gtgattcctgcccaggagaagttcatcaggttcatcgaaagtagccgatacgtcccagtg
aagcctgctccctctggattcatcctcctcagggacctgcaacccaccgaggctgaggac
cttgcgctgaccgatgccccctcaacagtcgcagcaaccaccggcaacacggcagctgct
gcaggccagcagggatcaggatcatccgccatggctgtcgatgaggagccgcaaccacct
caacccttcgagtacacctcgtaa
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