Panicum virgatum (switchgrass): 120681043
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Entry
120681043 CDS
T07260
Name
(RefSeq) NF-kappa-B-activating protein-like
KO
K25931
NF-kappa-B-activating protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120681043
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120681043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nkap_C
Motif
Other DBs
NCBI-GeneID:
120681043
NCBI-ProteinID:
XP_039818533
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All DBs
Position
2K:47834745..47836669
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AA seq
517 aa
AA seq
DB search
MSRSERRLASAVVRLPGRSRVSASPSPRRRSPSPSPRRDRRRDRSPGPYRDRRRDDRSPG
PYRDRRRDDRSPGPNRDRRRDDRSPSPYRDRRRQWSPYHNDRGRDRDRVPPVRGGGGGGG
GAWSASDDDNDAELQGLSYFEYRRIKRQKLRKSKKRCIWTITPSPPRAEGDDESYGYSDV
EEEEKESPKKKGSPEASEEDSKDASESESGESDSLSESSESEASRRKRKGRKSSRRSSKR
SQRCNRRRSYNSESDEESESNDDSEGSFDSEDSRDRRSKKRSRKHKKSRRGRSSRRKKKI
QVTTSEQSSEEAELSVHSARDSNKKSKSSKWKRSKRSDSEESLPSDANPDVKEDEEIKEP
EIDPEAIKFKEMLEAQKKAALENDMPVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQQG
KRIPRRGEVGLSAEEIQKFEDLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYE
EKAKREHKVMADLQRLVQRTIGNDVGPSHDPFATTDS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctcggagcggcgcctcgcttccgccgtggtgcgcctccccggccgctccagg
gtctccgcctccccgtcccctcgccgccgctccccgtccccctccccgcgccgcgaccgc
cgccgcgaccgctcccccggcccgtaccgggaccgccgccgcgacgaccgctcccccggc
ccgtaccgggaccgccgccgcgacgaccgctcccccggcccgaaccgcgaccgccgccgc
gacgaccgctcccccagcccctaccgcgatcgccgacgccagtggtcgccgtaccacaac
gaccgcggccgggaccgcgaccgggttccccccgtccgcggcggcgggggcgggggcggg
ggcgcctggtccgcctccgacgacgacaacgatgcggaactccagggcctcagctacttc
gagtaccgccgcatcaagcgccagaagctccgcaagagcaagaagcggtgcatctggacc
attacgcccagcccgcctcgtgccgagggcgacgatgaaagctacggttacagcgacgtg
gaggaggaggagaaggagtccccgaagaagaagggctcgccggaggccagcgaggaggac
agcaaggatgcctcggagtccgagtctggtgagtctgatagcctgtccgaatccagcgaa
tccgaggcttctaggaggaagcggaaagggagaaagagcagtcgccgtagtagcaagcgg
agtcagcgctgcaatcgccgtcgctcatacaattctgagagtgacgaggaaagcgagagc
aacgatgattcagagggctcgtttgattctgaggattctagggataggaggagcaagaag
aggtcgcggaagcacaagaaatctaggaggggtaggagctccaggaggaagaagaagatc
caggttacaacatctgagcaaagctccgaggaggcggagctttctgtccatagcgccagg
gacagtaacaaaaagagtaagagctcaaagtggaagaggagcaagcggtcagactctgaa
gaatcgttaccttctgatgccaatcctgatgtcaaggaagatgaagaaataaaggagcca
gaaattgatccggaagcgatcaagttcaaggaaatgcttgaggcccagaagaaagctgcc
ttggagaatgatatgcctgttgggccgatgcctcttccgcgtgcagaagggcacattagc
tatggtggtgcactaaggcctggtgaaggtgatgctattgcacagtatgttcagcaaggc
aagcgtattccacgacgtggtgaggtcggtctgtctgcagaggagattcagaagtttgag
gatttggggtatgtgatgagtggaagtagacaccagaggatgaatgctatccgtatcagg
aaggaaaaccaagtttacagtgctgaggataagagggcgctggctatgtttaactatgag
gagaaggcgaagcgggaacataaggttatggctgacttgcagcgcttggtgcagagaacc
attggcaatgatgtggggccttcacatgatccgtttgccactactgatagctga
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