Panicum virgatum (switchgrass): 120681089
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Entry
120681089 CDS
T07260
Name
(RefSeq) ribonuclease TUDOR 1-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
SDH_C
Motif
Other DBs
NCBI-GeneID:
120681089
NCBI-ProteinID:
XP_039818567
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Position
7N:complement(27117275..27125053)
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AA seq
908 aa
AA seq
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MEVSCTDSSHHGTSPAQNKRELLASSAMAASGWINGKVKAVPSGDTLVIMGRAKAETLPP
EKSITLSSIIAPRLALRYGSDEPFAWDSREFLRKLCIGQDVKFKVEYIIPASGREFGRVY
LAGDQNIASLVVAQGFAKVKQQRQKGDTSPYVTELLRLEEIARDQGLGCWSKEPGAVEAS
VRILPSLTIAEANPSGTKGFVAEMKGKALQAIVEQVRDGSTIRVYLIPSFSFVQVYVAGV
QAPSMGRRLPSVVAQKEVTNNVDADGKASRDAQEPPILGTLQKPVASAVTYSEIPPDRFG
KEAKHFTETKVLNREVRIILEGTDSFDNMFASVYYSDGNTAKDLALELAENGFAKYMEWS
ANMLGAETKRKLKNAELQAKKEQLRIWTGFQPPVTNTTAIHNQKFTGKVIEVVNGYCIIV
ADDILPGGSPSAERRVNLSSIRPPKLVDSFGESKTIEHFACAAKEFLRTRLIGKQVHVSM
EYSRRINISNRQVAANKTNIVDDKILDYGSVFLPPHVGSSGNLLGANVAELLLSRGCADI
TRHRDYEERSHHYDALLAAYSRAEKAKKGYHAKKDYPATHMNDLTTVPAKKARDFFHLLQ
RNKRHSAVVEYIFSGHRFKLTMPNETSTIAFSFSCVRCPGKNEPYSDDAIALMRRTILQR
DVEIEIEAVDRTGTFLGSLWESKNNMAYVLLQSGLAKLSSFGLDRISEAQTLIRAEKYAQ
QKKLKVWENYNEAEVIPQRSLAGQNGKETFKVIVTEVIGGGMFYAQIVGDRRLDNIRQEL
ASMKFNDASDTLIAEDFSYTLSDTLEVQPEHTPSDTSEVGVEPKNHVVPLRFKWSSLFKD
EVDTLKDEIPPVGTSEAEDLAANVPSDVVPFNPTKGDVVLAQFTVDNSWKRAMNRKSSNV
ISSESIIK
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttcctgcactgattccagccaccatggtacatcaccggcgcaaaataagagg
gaactgctagcttcttcagccatggcagcgtcgggctggattaatgggaaggtcaaggcc
gtgccttcgggcgacaccctggtcatcatggggagggcaaaggccgagacgcttccaccg
gagaagtcgatcaccttgtcgtccatcatcgctccaaggctggcattgcgttatgggtca
gacgagccgttcgcctgggatagtagggaattcctgagaaagctttgcattggacaggat
gttaagttcaaagtagagtacataattcctgcgtcaggccgggaatttggtagggtttat
cttgctggagatcagaacattgcgagcctggttgtcgcccaggggttcgccaaggtaaaa
cagcaacgtcagaagggtgacactagtccatatgttacagagttactaagattggaggag
attgctagagaccaaggtttaggttgttggagtaaggaacctggtgctgtggaggcttca
gtaagaattcttccatcattaaccatcgcagaagccaacccttctggtacaaagggtttt
gttgctgagatgaaagggaaggctttgcaggccattgttgagcaagtgcgtgatggtagc
actattcgtgtctacttgatccctagctttagttttgtccaggtttacgttgccggtgtt
caggctccatccatgggaagacggcttccaagtgtggttgctcagaaagaagtaactaac
aatgttgatgccgatgggaaagcatctcgagacgctcaagaaccaccaatattggggaca
ttacaaaagccggtagcatctgcagttacttattctgaaattccaccagataggtttggt
aaggaggcaaagcacttcactgagacaaaagttctcaatagagaagtgcgtattatacta
gagggaacagacagttttgataacatgtttgcttcagtgtattattctgatggaaataca
gctaaggacttagcgcttgagcttgcagaaaatggatttgcaaagtatatggaatggagc
gcaaacatgcttggagctgagaccaaaagaaagcttaagaatgccgaacttcaggctaag
aaggaacaactaaggatatggacgggatttcagccacctgttacaaatacaacagcaata
cacaaccagaaattcacaggaaaagttatagaggtggtgaatgggtactgtattattgtt
gctgatgatattttacctggtggaagtccttcggcagagcggcgtgtaaatctttctagc
atcagacctcctaaattggttgattcttttggagaaagcaaaacgattgaacattttgct
tgtgcagccaaggaatttttgcgcacacgtctaattggcaaacaggttcatgtatcaatg
gagtattctaggagaatcaacatttcaaatagacaagttgctgcaaacaaaaccaacata
gttgatgacaaaattttggattatggatctgtttttctacccccgcatgttggtagctct
ggcaacctacttggagccaatgtcgccgagctcttgctttctcgaggatgtgctgatatc
acaagacaccgggactacgaggagaggtcgcaccactatgatgcactcttggcagcctat
tcacgtgctgaaaaagcaaagaaaggatatcatgctaaaaaggattatcctgcaactcat
atgaatgatttgacaacagtacctgccaagaaggcgagagattttttccacctcttgcag
cgaaataagaggcactctgctgttgttgagtatatttttagtggacatcgcttcaaacta
acaatgcctaatgagacaagcaccattgccttttcattctcctgtgttcggtgccccggt
aaaaatgagccttactcagatgatgccattgctctaatgaggagaacaatacttcaacgt
gatgtcgagattgagattgaagctgtggataggactgggacattcttaggttccttatgg
gagtccaagaacaatatggcttatgttcttcttcaatccggcctagccaagcttagttct
tttggacttgacagaatctccgaagctcaaactctcataagggcggaaaagtatgcacaa
caaaagaaattgaaggtgtgggagaattacaatgaagcggaagtgattccccaaagatcg
ttggctggacaaaatggaaaagaaactttcaaggttattgtaactgaagtcattggtggt
ggaatgttctatgcccaaatagttggcgaccgtcgcttggacaacattcgacaagagctg
gcttctatgaaatttaatgatgcatcagacactttgattgctgaagatttctcatatact
ttatcagataccttggaagttcaaccagagcatactccatcggatacttcagaagttgga
gttgagccaaagaatcatgtggttcctcttcgttttaagtggtctagtttgtttaaagat
gaagtagatactttgaaagatgaaattccgccagttggtacttcggaagctgaagatttg
gcagctaatgttccatctgatgttgttccatttaatccaaccaagggagatgtggtgcta
gcccaattcactgtcgataattcttggaaaagagccatgaatcgtaaaagctcaaacgtt
attagttctgagagtattataaaatga
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