Panicum virgatum (switchgrass): 120681094
Help
Entry
120681094 CDS
T07260
Name
(RefSeq) heat stress transcription factor B-1-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120681094
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
120681094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
HALZ
Motif
Other DBs
NCBI-GeneID:
120681094
NCBI-ProteinID:
XP_039818573
LinkDB
All DBs
Position
2K:47899423..47905158
Genome browser
AA seq
305 aa
AA seq
DB search
MELEAEAVAAAGQPPASSKPTRAAGGPAPFLTKTHQMVEEASTDEVISWAEQGRSFVVWK
PVELARDLLPLHFKHCNFSSFVRQLNTYGFRKVVPDRWEFANDNFRRGEQGLLSGIRRRK
STTPQPSKSGGSAGVNVAFPPPMPPASGITSGGGNERSSSSASSPPRADLTSENEQLKKD
NRTLATELAQARRQCEELLGFLSRFLDVRQLDLGLLMQEDVRAAAGDAHQQQQQQQRRAA
ADPLERGGEEGKSVKLFGVLLKDAARKRGRCEEAAASERPIKMIRVGEPWVGVPSSGPGR
FGGEN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaactggaagcggaggccgtggcggcggcggggcagccgccggcgtcgtcgaagccg
acgagggcggccggcgggcccgcgccgttcctgaccaagacgcaccagatggtggaggag
gcgtcgacggacgaggtgatctcgtgggcggagcaggggcgatccttcgtggtgtggaag
cccgtggagctggcgcgcgacctcctcccgctccacttcaagcactgcaacttctcctcc
ttcgtccgccagctcaacacctacggtttccggaaggtggtgccggaccggtgggagttc
gccaacgacaacttccggcgcggcgagcaaggcctcctgtccggcatccgtcgccgcaag
tccaccacgccgcagccctccaagtccggcggcagcgccggcgtgaacgtcgcgttcccg
ccgccgatgccccccgcgtcgggcatcacgtccggcggcggcaacgagcgcagctcctcc
tcggcgtcgtcgccgccgcgggccgacctcaccagcgagaacgagcagctcaagaaggac
aaccgcacgctggcgaccgagctggcgcaggcgcgccggcagtgcgaggagctgctgggc
ttcctctcccggttcctcgacgtccgccagctcgacctcgggctgctcatgcaggaggac
gtccgggcggcggccggggacgcgcaccagcagcagcagcagcagcagcgccgcgccgcg
gccgacccgctggagcgcggcggcgaggaggggaagagcgtgaagctcttcggcgtgctc
ctcaaggacgccgcgaggaagaggggccggtgcgaggaggcggcggccagcgagcggccc
atcaagatgatcagggtcggtgagccgtgggtcggcgtgccgtcgtcgggcccgggccgg
ttcggcggtgagaactaa
DBGET
integrated database retrieval system
