Panicum virgatum (switchgrass): 120681201
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Entry
120681201 CDS
T07260
Name
(RefSeq) probable leucine-rich repeat receptor-like protein kinase At5g63930
KO
K27590
tyrosine-sulfated glycopeptide receptor
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
120681201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_1
Pkinase
LRR_14
PK_Tyr_Ser-Thr
LRR_4
LRR_8
UDPGT
LRRNT_2
LRR_ComC
EryCIII-like_C
LRR_LRWD1
Pkinase_fungal
APH
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
120681201
NCBI-ProteinID:
XP_039818656
LinkDB
All DBs
Position
7N:complement(36211637..36218916)
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AA seq
1643 aa
AA seq
DB search
MERRALLLGVALAFLLASGSQGLNHEGWLLLELKSQIVDTLHHLDSWNARDPTPCAWRGV
NCSSAPTPAVVSLDLNNMNLSGTVAPSIGGLTELTRLDLSFNGFYGPIPAQIGNLSNLEV
LNLFNNNFIGIIPPEVGKLAKLVTLNLCNNKLHGPIPDEIGNMVSLQDLVGYSNNLTGSL
PHSLGKLKNLKNIRLGQNLISGNIPVEIGECLNITVFGLAQNNLEGPLPKEIGRLSFMTD
LILWGNKLSGVIPPEIGNCTSLGTIALYDNNLVGPIPATIGNITNLQKLYLYMNSLNGTI
PSDIGNLSLAQEIDFSENFLTGGIPKELGNIPGLYLLYLFQNQLTGSIPTELCGLRNLSK
LDLSINLLTGPIPAGFQYMRNLIQLQLFNNKLTGNIPPRFGIYSRLWVVDFSNNSITGQI
PKDLCRQSNLILLNLGSNMLTGNIPHGITNCKPLVQLRLGNNSLTGSFPTDLCNLVNLTT
VELGRNKFSGPIPPQIGNCKSLQRLDLTNNYFTSELPREIGNLSKLVVFNISSNKLGGNI
PLEIFNCTVLQRLDLSQNSFEGSLPNEVGRLPQLELLSFADNKLTGRIPPILGKLSHLTA
LQIGGNQLSGEIPKELGLLSSLQIALNLSYNNLSGNIPSELGNLALLESLFLNNNKLTGE
IPTTFANLSSLLELNVSYNYLTGALPPIPLFDNMAVSCFVGNKGLCGGQLGRCGSQSSSI
SQSSNSVSPPLGKIIAIVAAVIGGISLILIAIIVYHMRKPMETVAPLQDKQLFSAGSNMH
VSAKDAYTFQELVTATNNFDESCVIGRGACGTVYRAILKAGQTIAVKKLASNREGSNTDN
SFRAEILTLGKIRHRNIVKLYGFIYHQGSNLLLYEYMSRGSLGELLHGQSSSSLDWETRF
MIALGAAEGLSYLHHDCKPRIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPYSKSMSA
IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLEQGGDLVTWVKNYIRD
NSLGPGILDKNLDLEDHSVVDHMIEVLKIALVCTSLSPYDRPPMRHVVVMLSETKDRTRV
SSASSPASDDSSKKDSSFAPLLAAIAIGCHRKSWQWTVTFQQIGASAFRHSFRAQAASVA
GGSVEVLESTPPTHAPNRSAPPSIAMASEEKVSPHVILFPFLAHGHVPAFLRLADLLRAR
RPGLDVTLVSTPRILGSLSLPPASPPLRLHALPFSPADHGLPPGAESLADIQVHQFITFF
QASESLRPAFEEFLSGFGSRSPVCIVSDAFFGWTADVARARGAPHAVFLPGGAFGNAVFF
SVWEHLPHARTAADEFPLPDFPGVVLHRTQIPRYMLPATGADPWTAFFRRVIAFCRKTDA
VLVNTVRELEPSGLNMLRRSLGVQPRPIGPVLAAPAPSDSRDDASIFRWLDAHPPRSVLY
ISFGSQNSISADQMRELALALEASGRRFLWALRPPLGSDAKGAFDPEWLPAGFEERAARA
SAGLVVRGWAPQVRVLAHPSTGAFLTHCGWNSVLESLSRGVPLLGWPLGAEQFFNAKLVA
EWGVCVEVARGNLESSAVDKEKVAGAVRTVMGENATGDEMRRKAAAIARAMAAAWEAPGG
SAAESLEGFLRCVEASVRRYAPL
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggagcgccgggctttgctcctcggggtggccctggcctttctgctggcctccggctcc
cagggcttgaaccatgaaggatggcttctcctggagctgaagagccagatagtcgacacc
ctccaccacctggatagctggaacgcgagggatccaacaccatgcgcgtggaggggtgtc
aactgctcgtcggcgccaactccagcggtggtgtctctcgacctcaacaacatgaacctg
tcaggcaccgtcgcgcctagcattggcggcttgactgagctgacgcggctcgatctatcc
ttcaatggattctatggtcccatccctgcacagattgggaatttgtcgaacctggaggtt
cttaacttgttcaacaacaacttcatcggtataattccccctgaggtcgggaagctggct
aagctggtcacgcttaatctgtgcaacaacaagctccatggtccgatacctgatgagatt
ggtaatatggtatcacttcaggacttggtagggtacagtaataatctcactggttcacta
cctcattcactcggcaagttgaagaacctgaaaaatattcggttaggccagaatcttata
tcaggcaacattcctgttgagataggtgaatgcctgaatataactgtgtttggtcttgca
cagaacaatttggagggtcctttacctaaagagattggcaggttgagtttcatgactgac
ttaatcctatgggggaacaagctttcaggtgttattccgcctgagatagggaactgtaca
agtcttggcacaattgccctctatgataataatctagttggtcccatacctgcaacaatt
gggaacatcacgaatcttcagaagctatacctttacatgaactcattaaatggtacaatt
ccatctgacattgggaatctttctcttgcacaagagattgacttttcagagaatttctta
actggagggataccgaaagagttgggcaacataccaggcttgtatttgctctacctcttc
cagaaccagcttacaggctctattcctacagagttgtgtgggctgagaaacttgagtaaa
cttgatctatcgatcaatttactcactggtccgattccagctggatttcagtacatgaga
aatctaatccaattgcaactcttcaacaataaactcacaggcaacatacctccaaggttt
ggcatttatagccgactttgggtggtggatttctcaaacaacagtattactgggcagata
ccgaaagatctttgcaggcagtcaaaccttattttgttgaatttggggtctaacatgctt
acagggaacattccccatggaatcacaaactgtaaaccattggtgcagcttcgtcttggc
aacaacagtctgacaggaagcttccctactgatctctgcaatctggtaaatttgacaaca
gttgagctgggtcgaaacaaatttagtggcccaattcctcctcagataggcaattgcaag
tctctgcaaaggctagaccttacaaataattatttcacgtcagaattgcctcgagaaatt
ggtaatttgtcaaaactcgttgtcttcaatatctcatctaacaaactaggaggaaacata
ccactggaaattttcaattgtacagtgttgcaacgacttgatctcagccagaatagcttt
gaaggttcgttgccaaatgaagttggtagactgccacaactagagctgctatcttttgct
gataataagctaactggacggataccgcccattcttggtaaactatcacatttgacagca
ctgcagattggtggcaaccagttatctggtgaaatcccaaaggagttgggtttgctgtca
agcttgcagattgccttgaatttgagctacaacaacctctctggcaacattccatcagag
cttggtaaccttgcactgttggaaagtttatttcttaataacaacaagctgactggtgaa
atcccaactacatttgccaatctgtccagtttacttgagctcaatgtctcctacaattat
ctcactggtgccctcccgccaataccactttttgataatatggctgtgtcctgttttgtt
ggaaataaaggactatgtggtggacaacttggtagatgtggatcccagtcatcatctatt
tcccagtcatccaattcagtcagtcctcctttgggcaagatcatagcaattgttgcggct
gtcattggagggatttcacttattcttattgcaataattgtgtaccatatgagaaaacca
atggagacagtagcacccttgcaagacaagcaacttttttcagctggttctaacatgcat
gtttctgctaaggatgcatatacatttcaggaattggtcactgctacaaataactttgat
gagagttgtgttattggaaggggagcttgtgggacggtgtacagagccatcctgaaggct
ggacagacaattgcagtaaagaagcttgcttctaacagggaagggagcaacacagacaac
agctttcgtgcagagattctgactcttggaaagataagacatcgtaacattgtgaagctg
tacggttttatatatcaccaaggttccaaccttctactctacgagtacatgtcaagaggc
agtcttggtgagctacttcatggacaatcatcttcttcacttgattgggagacacgcttc
atgatagctcttggagcggctgaagggctttcgtatttgcatcacgattgcaagcctcgc
atcatccaccgtgatatcaaatccaataacattttacttgatgagaactttgaagcccat
gttggtgattttgggttggcaaaggtgattgacatgccatactcgaagtcaatgtccgca
attgcaggttcatacggctatatagccccagaatatgcttataccatgaaggttactgaa
aaatgtgacatatatagctatggagtcgtgttgctggagctgctaactgggcgtgcacct
gtgcaacccttggaacagggaggtgatctagtaacatgggtgaaaaactacatcagggac
aattctttaggtccagggatacttgataaaaatttggatttagaagaccatagcgtcgtc
gatcatatgatcgaggtcttgaaaattgccttggtatgtactagcttgtctccatacgat
agaccaccgatgcgtcatgttgtagttatgctaagcgagactaaagataggaccagggtg
agctctgcctcctcacctgcctctgatgattcttcaaagaaggatagctcattcgcccct
ctcttggcggccattgccattggatgccacagaaaaagttggcaatggacggtgactttc
caacagatcggcgcgtcagcctttcgtcacagcttcagagcacaagcggcatcagtcgcc
ggcggctcagtggaagtgcttgagtccactccacccacccacgcacccaacagatcagcg
cctccatccatcgccatggcgtcggaagagaaggtaagcccacacgtcatcctcttccct
ttcctggcgcacggccacgtccccgccttcctccgcctggccgacctcctccgcgcgcgc
cgcccggggctcgatgtcacgctcgtctccaccccgcgcatcctgggctccctctccctc
ccgccggcgtcccctcccctgcgcctccacgcgctccccttctcgcccgccgaccacggc
ctgcccccgggcgccgagtccctcgccgacatccaggtccaccagttcatcaccttcttc
caggcctccgagtcgctccgccccgcgttcgaggagttcctctcgggcttcggttcccgt
tccccggtctgcatcgtctccgacgcctttttcgggtggacggccgacgtcgcgcgcgcg
cggggcgcgccccacgccgtgttcctcccgggcggcgcgttcggcaacgccgtgttcttc
tccgtgtgggagcacctcccgcacgcccgcacggccgccgacgagttcccgctgccggac
ttcccgggcgtcgtgctccaccgcacgcagatcccgaggtacatgctccccgcgacgggg
gcggacccctggacggccttcttccggcgcgtcatcgccttctgccgcaagaccgacgcg
gtcctcgtcaacaccgtccgggagctggaaccctccggcctcaacatgctccgaagaagc
ctcggcgtccagccgaggccgatagggccggtcctcgcggcgccggccccgtcggactcg
cgggacgacgccagcatcttccggtggctggacgcgcacccgccgcgctcggtgctgtac
atatccttcgggtcgcagaacagcatcagcgcggatcagatgagggagctcgcgctggcg
ctggaggcgagcggccgccgcttcctctgggcgctccggccgccgctggggtccgacgcg
aagggcgcgttcgatcccgagtggctcccggccggcttcgaggagcgagcggcgcgggcg
agcgcggggctggtggtgcgcgggtgggcgccgcaggtgcgggtcctggcgcacccgtcg
acgggcgcgttcctgacccactgcgggtggaactccgtcctcgagagcctctcccgcggc
gtgccgctgctcgggtggccgctgggcgccgagcagttcttcaacgcgaagctcgtggcc
gagtggggcgtctgcgtggaggtggctaggggcaacttggagagctcggcggtggataag
gagaaggttgcgggggccgtgcggacggtgatgggggagaatgcgacgggcgatgagatg
aggagaaaggcggcggcgatcgcgcgcgccatggcggccgcgtgggaggcgcctggcggg
tcggcggcggagagcttggaagggttcctgaggtgcgtcgaggcgtccgtgcgccggtat
gccccgctttga
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