Panicum virgatum (switchgrass): 120681376
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Entry
120681376 CDS
T07260
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase ESS1-like
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120681376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120681376
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120681376
Enzymes [BR:
pvir01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120681376
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120681376
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
120681376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
X8
Motif
Other DBs
NCBI-GeneID:
120681376
NCBI-ProteinID:
XP_039818803
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All DBs
Position
7N:complement(48755969..48759071)
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AA seq
274 aa
AA seq
DB search
MDLPSPSSTAAAEERPSQIRPPNAHQNPSLLCSPRTKASYLRRPPETKKKRGRTPVQALH
VGSASSTGSPVASEWNTNGAQLQPKTQTHPKAFLLLRVATQHAKIGSESPAADGAARKRP
GGGDAPAPAPADKRRRPEPPSSSGSRDRHHQARRPPLAEEKVRASHILIKHEGSRRKASW
RDPEGVAISATTRDDAADLARALRDQIVSGERKFEDIAAENSDCNSAKRGGDLGSFGRGK
MQKAFEKAAFALKVGEISDVIDTESGVHIIKRTG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggatctgccgtcgccgtcgtcgaccgccgccgccgaggaaagaccgagccaaatccgg
cctccaaacgcccaccaaaaccccagcctgctctgtagcccaagaacaaaagcctcgtac
ctccgccgcccaccggagacaaagaagaaacgaggccgaactcctgtacaggcgctccac
gtggggagcgcctcctccacgggctcgccggtggcgtcggagtggaacaccaacggggcc
cagctgcagcccaaaacccaaacccacccaaaagcttttctgctcctgcgcgtcgcgacc
cagcacgccaagatagggtcggagagccccgccgccgacggcgccgcccgcaagcggccc
ggcggcggcgatgcccccgccccggcgcccgccgacaagcgccgccgcccggagcccccg
tcgtcctccggctcccgcgaccgccaccaccaggcccgccgcccgcccctggccgaggag
aaggtgcgcgcctcccacatcctgatcaagcacgagggctcccgccgcaaggcctcgtgg
agggaccctgagggcgtcgccatctccgccacgacccgcgacgacgccgccgacctcgcg
cgcgcgctccgcgaccagatcgtctccggggagcgcaagttcgaggacatcgccgccgag
aactccgactgcaattcggccaagcgcggcggtgacctcggttcatttgggaggggtaag
atgcaaaaggcttttgagaaggctgcgtttgctctgaaggtgggggagataagtgacgtg
attgatacagagagcggggtgcacatcatcaagaggactggctaa
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