KEGG   Panicum virgatum (switchgrass): 120681388
Entry
120681388         CDS       T07260                                 
Name
(RefSeq) F-box/LRR-repeat protein 4-like
  KO
K10268  F-box and leucine-rich repeat protein 2/20
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120681388
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     120681388
SSDB
Motif
Pfam: LRR_SKP2 LRR_FBXL15 F-box PRAME_C F-box-like
Other DBs
NCBI-GeneID: 120681388
NCBI-ProteinID: XP_039818811
LinkDB
Position
7N:complement(49587154..49590210)
AA seq 548 aa
MPANHSPFPSPHPRGRPGWPIRWLDWPPSAPTAPTSSRHAAAVLGGGGCRRPGCYAGTDA
ALCDDLLQEVFRLLPPAAAPAVSLVSRRWLSLLRASTSSLTLRLPASSDAAAATLAALLS
HYPFLSALTVVSAATPARDADAVLLAVAAAPAAARFSTLRLLPDSAVSPAALLAACPALS
GLTSLHLTAVRPLSFRWLELLPHLKSFALVNSAASVDYAGSGSDDADGGEAEAEAARALP
LERLSLCGIRSGDRGLGWLWRQCGSLKWLQLRACDGTGDGPASPSFAGCLAGLLALELRA
CRAVADRVLLLAADHCHALTSLLVYDGGSSEALHRFIQHRAAGLHTLDLRLPLDLHNDHL
LAIGAEPVHGGLEPTHNLAALRLQSCVLITGDGLRSLARTATGAGIEELALVSCDVVERE
PGLLTFLSQSMRRLRRLDLSYNETLSDKVIGAMLSSCRNLIDIRLRGCRGLTGASLVSLL
RHCGQSLEILDISCCPSIAVGNVEFFVQRATRLNHIIIEESAISEELKAIAQKKGMKIRS
LLPYEGPF
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgccagctaaccactcacccttcccttccccccacccgcgcggccggccgggctggcca
atccgatggcttgactggccccccagcgcaccgacggcgccgacaagctcccgccacgcc
gccgccgtcctaggcggcggcggctgccgtcgccctggctgctacgccggcacggacgcc
gcgctctgcgacgacctgctgcaggaggtgttccgcctcctgccgccggccgccgcgccg
gccgtgtccctcgtttcccggcgctggctctcgctcctcagggcctccacgtcgtccctg
accctccgcctgccggcctcctcggacgccgcggcggcgaccctcgccgcgctgctgtca
cactacccgttcctctccgccctgaccgtcgtctccgctgctactccggcccgggacgcc
gacgccgtgctgctcgctgtcgcggccgcgccggccgccgccaggttctccacgctgcgg
ctcttgcccgattcggcggtctcccccgccgcgctgctcgccgcctgccctgccctgtcc
ggcctgacgtcgctccacctcaccgccgtccgccccctgtcgttccgctggctcgagctc
ttgccgcacctcaagtcgttcgccctcgtcaactccgccgccagcgttgactacgctggc
tcaggctcggatgatgccgacggtggggaagccgaggccgaggccgcacgggcgctgccg
ctggaaaggctgtcgctttgcggcatccgctccggcgaccgagggcttggatggctgtgg
cggcagtgcgggagcctcaagtggctgcagctgcgcgcctgcgacggcactggggatggc
cccgcgtcgccatccttcgcgggttgcctcgctggattgctggcgcttgagcttcgtgct
tgccgtgctgtcgccgaccgtgttctccttcttgcagctgaccattgccacgcgctgaca
tccctcctggtgtatgatggcggcagcagcgaggctcttcaccggttcattcagcaccgt
gctgctggtctgcacaccttggaccttcgcctaccgctcgacctgcacaacgatcatctc
cttgccattggagctgagccagttcatggtggtctagagccaacacataacctagctgca
ctccgccttcagagctgcgtcctaatcactggggatggactccggtctctcgcacgaaca
gccactggggcgggcatcgaagagcttgctttggtgagctgtgacgtggtggagcgggag
cccgggttactgacatttctcagccaaagcatgcggcgtcttcgtcgccttgacttgtct
tacaatgagacactgagtgataaggtgatcggtgccatgctgtcatcctgccggaatctc
atcgacatcagactcaggggatgccggggcctaacgggagcctccctggtctcacttctt
aggcactgcgggcagtcgctggagatccttgacatctcctgctgccctagcattgcagta
ggcaatgtcgaattctttgttcagcgcgccactcggttgaatcatattataatcgaggag
agcgcgatatcagaggaattgaaggcaattgctcagaagaaaggtatgaagatcagatca
ttattgccatacgaaggaccattctga

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