Panicum virgatum (switchgrass): 120681429
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Entry
120681429 CDS
T07260
Name
(RefSeq) T-complex protein 1 subunit alpha-like
KO
K09493
T-complex protein 1 subunit alpha
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120681429
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120681429
04147 Exosome [BR:
pvir04147
]
120681429
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP60 / Chaperonin
120681429
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
BBS-CCT complex
120681429
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120681429
Exosomal proteins of colorectal cancer cells
120681429
Exosomal proteins of bladder cancer cells
120681429
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SCAB_CC
Motif
Other DBs
NCBI-GeneID:
120681429
NCBI-ProteinID:
XP_039818856
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All DBs
Position
7N:40220269..40225784
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AA seq
540 aa
AA seq
DB search
MAIDILGERQSGQDVRTQNVMACGAVANIVKSSLGPVGLDKMLVDDIGDVIITNDGATIL
KMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVKNKIHPTSIISGYR
LAMREACKYVEEKLAVKVDRLGKDSLINCAKTSMSSKLIDSDSDFFATMVVDAVQAVKTT
NAKGEVKYPIKSINVLKAHGKSQKDSYLLNGYALNTGRAAQGMPTRVTPARIACLDFNLQ
KTKMQLGVQVLVTDPRELEKIRQRESDITKERIEKILKAGANVVLTTKGIDDMSLKYFVE
AGAIAVRRVRKEDLRHVAKATGATMITTFADMEGEETFDSSFLGHADEVVEERIADDDVI
LVKGTKNTSAVSIILRGANDFMLDEIERSLHDALCIVKRTLESNMVVAGGGAVEAALSVY
LENLATTLGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHTAQTKADKQH
FSSMGLDLSKGIIRNNLDYGVIEPAMSKVKIIQFATEAAITILRIDDMIMLTKEEGNEEE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgacatcctcggcgagcgccagtccggccaggacgtccgcacgcagaacgtg
atggcgtgcggggcagtggccaacatcgtcaaatcctcgctcggccccgtcgggctcgac
aagatgctagtggatgacattggtgatgttataataactaatgatggagccaccatactg
aagatgttggaagttgagcacccagctgccaaggttcttgttgagttggctgagctccaa
gatcgtgaggtaggagatggaacaacttcagttgtcatcatagcggcagagttgctcaag
agaggcaacgatcttgtgaaaaataagatccatccgacctctataatcagtggctacagg
cttgctatgcgtgaagcctgcaaatatgtggaggaaaagttggcagtcaaggttgataga
cttggaaaagactcccttattaactgcgcaaaaactagcatgtcatcgaaactgattgat
agtgacagtgatttctttgcaactatggtcgttgatgcggttcaagctgtgaagactaca
aatgccaagggggaagtgaagtatccaatcaagagcatcaatgttttgaaagctcatggt
aaaagtcagaaggatagttatctgctgaatgggtacgcattaaacacaggccgtgcagct
caaggaatgcctactagagtaactcctgctagaattgcttgtctcgattttaaccttcag
aagacaaaaatgcaacttggtgttcaagttcttgtaactgatccaagggaacttgagaag
attcgtcaaagagaatctgacataacaaaggagcgaattgagaaaattctcaaggctgga
gctaatgttgtgttgaccaccaagggaattgatgatatgtccttgaagtactttgtcgag
gctggagcaattgcagtaaggcgtgtgcgcaaggaagatttgcgtcatgttgccaaggcc
accggtgcaactatgattactacttttgcggacatggaaggcgaagaaacatttgattca
tcattccttggacatgcggatgaagttgtggaggaaagaattgcagatgatgatgttatc
ctggtgaaaggcacgaagaacaccagcgcggtgtccataatacttagaggtgcaaatgat
ttcatgcttgatgagattgagcggtccttgcatgatgccttatgcattgtgaagagaacc
ctggagtcaaatatggttgttgctggcggtggtgcagtcgaagctgcattatcagtttac
ttggagaaccttgcaacaaccctgggatctagggaacagttggcaattgctgaattcgct
gaatctttgttaatcatacccaaggtactctctgttaatgctgcaaaagatgcaactgag
cttgtagcaaaacttagggcatatcatcatactgctcaaacgaaggctgataagcaacat
ttctcaagcatgggtcttgacctctctaaaggtatcattcgcaataaccttgattatggt
gtgattgaacccgcgatgagcaaagtaaagattattcagtttgccactgaggcagccatc
actatcctgaggatcgatgacatgatcatgcttaccaaggaagagggtaacgaagaggag
taa
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