Panicum virgatum (switchgrass): 120681455
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Entry
120681455 CDS
T07260
Name
(RefSeq) WD repeat-containing protein 25-like isoform X1
KO
K24742
WD repeat-containing protein 25
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120681455
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
120681455
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_RFWD3
eIF2A
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_SPT8
VPS8_N
WDR54
Motif
Other DBs
NCBI-GeneID:
120681455
NCBI-ProteinID:
XP_039818887
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Position
7N:27306656..27313611
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AA seq
480 aa
AA seq
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MLVVSACQITPSGVGVEPFVQVGSVSVPDLRLPMDLLSAAYGGATSDEDDDEPPSFPPVA
TALNSFAPPPVKRPRWEYQPCLPPPSSFPQPPLPKAAPLPTSPASGRYISKRQRALLAAS
RAPVDAASLLPPQTTAEVDSSVGSITDSNLRADILHSLRCQPKPGSSKSLPSKLSVSLKG
HTKAINCIDWSPTHAHLLTSAGMDHTVHVWNVWDKGNTTACVLKHHTAAVKDVRWSPHNL
SLLSGGLDCSVQLIDVVEGKVIKVFKEDQAVEVIKFNPSNPNLFLSGGSKGSLRLWDIRS
GLVTKEFHRSLGTILDIEFSADGRQFISSTDTTRSNISENTIIVWDVLRQVPLSNQVYTE
AFTCPCVRYHPHEASFVAQSNGNYIAIFSARPPFKLNKYMRFEGHGVWGFPIKCNFSPSG
RELASGSSDGSIYFFDYKSARPLRKIEAFKEACTDVVYHPVIPNVIASCGWTGEISVFER
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgttggtggtttctgcttgtcagatcactccaagtggtgtaggtgttgagccgttcgtt
caggttgggtcggtctcggtcccagacctccgattgccgatggatctcctctctgctgcg
tacggcggcgctacctctgacgaggacgacgacgagccgccctccttcccgccagtcgcc
accgccctcaactccttcgcaccacctcccgtaaagcggccgcggtgggaataccaacca
tgcctccccccaccctcgtccttcccgcagccgcccctacccaaagcagcgccgctgccg
acatctccagccagcggcaggtacatctccaagaggcagcgcgccctcctggctgcatct
cgagcacccgtggacgccgcatcactccttcctccgcagacgacagcagaggtcgattcc
tcagttggctccatcactgattcaaatctgcgagctgacattttgcattccttgcgatgc
caaccaaagcctggctctagcaaaagtttgccttcaaagctctcggtttctttgaagggt
cacacaaaggcaataaattgtatagattggtcgccaactcatgcacatctactcacttct
gctggaatggatcatacagtccacgtatggaacgtatgggacaaagggaatactactgct
tgtgttttgaagcatcacactgctgctgtaaaggatgtgaggtggtcccctcataacctc
tctttactttctggagggcttgattgttccgtacagttaattgatgttgtggaaggaaag
gtaatcaaagtattcaaggaagatcaagctgtggaggttatcaagttcaacccaagtaac
cccaatctcttcctatctggtgggtcgaagggttctcttaggctatgggatattcgaagt
ggtctggtaacaaaagaatttcatagaagtcttgggaccatccttgacatcgaattcagt
gctgatgggagacaatttatctcttcaacggacacaaccagaagcaatattagtgagaac
actataattgtctgggatgtcctgcgacaagttccattatctaatcaggtttatactgaa
gcattcacatgcccatgtgtaagatatcacccgcatgaagcatcttttgttgcacaatcg
aacgggaactacattgctattttttcagcaaggccacccttcaagctgaacaagtatatg
cggtttgaaggacatggagtttggggtttcccgataaagtgcaatttttctccaagtgga
agagaacttgcatccggttcgtcagatggatccatttacttttttgattataaatcagca
aggcctttacggaaaatcgaagcattcaaagaagcctgcactgatgttgtataccaccct
gtaataccaaatgtgattgcttcatgtggctggactggtgaaatatctgtttttgagaga
tga
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