Panicum virgatum (switchgrass): 120681457
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Entry
120681457 CDS
T07260
Name
(RefSeq) probable alpha-amylase 2
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120681457
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
120681457
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Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
120681457
NCBI-ProteinID:
XP_039818891
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Position
7N:27360844..27364936
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AA seq
415 aa
AA seq
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MGQMVSDDKFEEQAARNGGIIKNGREILFQAFNWESNKHNWWSMLEEKVTDLAESGFTSA
WLPPPTQSLSREGYLPQNLYCLDSCYGSLSELKSLLHKMNEHNLRAMADVVINHRIGTTQ
GSNGMYNRYDGIPISWDEHAVTSCSGGKGNKSTGDNFDGVPNIDHTQTFVRKDIIEWLIW
LRRSVGFQDFRFDFTKGYAAKFVKEYIEESKPLFAVGEYWDSCEYSPPDYRLNYNQDNHR
QRIINWIDSTGGLCAAFDFTTKGILQEAVKGELWRLRDPEGKPPGVMGWWPSRSVTFIEN
HDTGSTQGHWPFPSDHIMEGHAYILTHPGIPAVFYDHFYDQGLSLHEEIAKLMQIRKCQD
IHSRSSVKILEAKSDLYSAIIDEKLCMKIGDGSWCPSEPEWRLAASGDRYAVWHK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggccagatggtttcggatgataaattcgaagaacaagcagctcgcaatggtgggatc
atcaagaatggaagggaaatcttattccaggcttttaactgggaatccaataagcataac
tggtggagtatgttagaggaaaaagtaactgatctggcagaatctgggtttacatcagca
tggcttcctccaccaactcagtcattatctcgagaaggctatctaccacagaacctgtac
tgccttgactcttgttatggttctctgtcagagctgaaatcattgcttcataaaatgaat
gagcataatctaagggctatggcagatgttgttatcaaccaccgaattgggactactcaa
gggtccaatggcatgtataatcgatatgatggcatcccaatatcatgggatgaacatgct
gttacatcttgttctggtgggaagggaaacaagagcactggggataactttgatggggtt
cccaacatagatcatacacagacatttgtacggaaagatattattgaatggctgatctgg
ctcaggagatctgttggttttcaagatttccgctttgatttcacgaaaggttatgcagca
aagtttgtgaaagaatatattgaggaatcaaaacctctttttgcagttggagaatactgg
gatagctgtgaatatagcccccctgattaccgattgaactacaatcaggataaccacagg
cagaggatcattaattggatagatagcactggaggactttgcgctgcatttgatttcaca
acaaagggtattcttcaggaagctgtcaaaggagagttgtggcggttgagagatccggaa
ggaaagccacctggtgtgatgggatggtggccttcgagatcagttacatttattgaaaat
catgacacagggtcaactcagggtcattggccttttccatctgatcatattatggaggga
catgcatatatactcacccaccctggcatccctgcggtgttctatgatcacttctatgac
cagggattgtcactccatgaggaaattgccaaactgatgcaaatcagaaaatgccaagac
atacatagccgttcgtcagtcaaaatattggaggcgaagtcagacctgtactctgcaatc
atcgatgagaagttgtgcatgaagatcggagatgggtcatggtgcccaagtgagccagag
tggaggctggcggcctctggagacagatatgctgtgtggcacaagtaa
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