Panicum virgatum (switchgrass): 120681524
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Entry
120681524 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120681524 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120681524
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120681524
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
120681524
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
120681524
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
120681524
NCBI-ProteinID:
XP_039818972
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All DBs
Position
7N:complement(41562824..41574757)
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AA seq
1194 aa
AA seq
DB search
MEAAASSLSSLLSTLRVDGPWTPPGTWESVTPESGAARAPGLGGRPHQEPIYEVASVSDD
ALVRLALHALYGVKSSLDEIDELFLLFSSNPADRTSNRVANVWSRSSSTMSVGHILKSIR
STGLAVFFLCKFVHFYLIQSRERNCTSRERHECEDSDDKDTEQHRPFSLVNQAFAAAVEK
VLEGYFCSLNTLPASVKLRRAVDKSGMPSKISDGASCNSTSEVTLLEVYLHTEELRRHVK
SLGNICFPKFAGLTLCQEGLNTDANVEFENFPRGSDLLSYLYVHLRDADPVHYELLKHLF
VRSCEPYFNFIKSWIYRASIDDPYEEFLITQTENKDTRGDSSDILDELTLFPLKQGRNHV
SAPCFLKEICHPLLRTGQQLQVLMRLLKSCHLSATGGDAYSSHSNIPMEGVLPWFYVPTE
SSVNSFPFSKGSVEAVTCKRDAMYKLMMEKLQHFFSNVEVIPFDTSISDAELCYYGDSNT
ALACNMAADDKDNDAPPTSQESSDKEDPLESSDKEDLLESSECSSYTSMDDVEAESATAC
DNLSGFTSYCTSTGEAKCSLVTRKLLSSDAGSVHHGINCVSPIDECEKDGKLYCRHVPMH
SQNTKHNVVPDALELDYQYSQFSPFDRFMKRTSCSSEKMNLVEEFLYTDHNSSLEKASHG
NVDYPLHSDSGSSRLLNSKNYEKSGKINQVWNTSIPYNLSVNPILKNAACCHTESDLQHK
SKNWALGSFDFESVKDPCEVYCGRNPSFPVESVNGAATVVQPSTAFQQPDCSRMILQAQA
RSQAYPTPSEEMAARDSIQENASGGAFWEKSLQYNDKSKEKTAVDFNPQLDMPLDIVIDK
CIIQEVLLQYKYVSSFTMKFLEEGFDLYAHLLALRRYHFMELADWADSFICSIYHKKWSF
VKSEQKRAEIQGIMNLALQRSSCDSDPYKERLFIYIREQPTVSCDASACGLDLLDEILLG
YKAEWPVNIVIAEDTVKIYSEIFCYLLQVRFAVFSLTEVWRFLKELTQFIGRSNHSTPDV
FKKLNFVMRVRHTIYHFLSTLQQYLHCHLSDISWRRFQHSLKNQVRDILDLEYVHMCYIN
DALDICFLSDGSKQVATIIKSMLQLALELRSCFQTLDGTSDLSVTQLSNLHSLINFSQVD
AIGTRFDGNIKDLYILHSKSSKYGELGLSRFWGYLNYNEYHSTKNSMDMGSFCF
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccgcctccagcctctcgtcgctgctctccaccctccgcgtggacggtccc
tggacgccgccgggaacctgggagtcggtcacccccgagagcggcgccgctcgtgcgccg
ggcctcggagggcgcccccatcaggagccgatctacgaggtggcgtcggtcagtgatgat
gctttggttcgtttggctttacatgcgctgtatggtgtcaaatcatcgttagatgagatt
gatgagcttttcctgttgttctcctcgaatccggcagataggacctctaatcgtgtcgcg
aatgtgtggtcacgttcatccagcactatgtctgtggggcatattctcaaatctatacgc
tctacaggtcttgcggtctttttcctttgcaagtttgtgcacttttaccttatccaaagt
cgagaaaggaattgcacaagtagagaaagacatgaatgtgaagattctgatgataaagac
actgaacagcatcggcctttcagtctagtaaaccaagcatttgctgcagcagttgaaaag
gttctcgagggctatttctgttccttgaatactttacccgcatcagttaagctcaggcgt
gcagtggataaatctggtatgccttccaagatttcagatggagcgagttgtaattccact
tcagaagtcactcttctggaagtttatctacacacagaggaattaagaaggcatgttaag
tcccttggaaatatttgtttccctaagtttgcaggtcttacgttgtgccaggagggtttg
aatactgatgcaaatgttgagtttgagaatttcccacggggcagcgatttgctttcctat
ttgtatgtccatcttcgtgatgctgatccagttcactatgaacttctgaaacatcttttc
gttcgctcttgtgagccatactttaacttcattaagtcatggatttaccgagcttctatc
gatgacccttatgaggaattcctcattacacaaactgagaataaggatactcgaggagac
tcttctgacatactagatgagctcaccctctttcccttgaagcagggaagaaatcatgta
tctgctccatgttttctaaaggagatatgtcatcctctcttgcgtactgggcagcagctt
caagtgctcatgaggcttctaaaatcatgccatttgtctgctaccggaggagatgcttat
tcctcccatagtaatattcctatggagggagttctcccatggttttatgtgccaactgag
tcctcagtgaattcatttccgttctcaaaaggtagcgtggaggcagtaacatgcaagagg
gatgctatgtacaagttgatgatggagaagctccaacattttttctcaaatgttgaggtg
attccttttgatacatcaatttcagatgctgagctgtgttattatggagacagcaatact
gcactagcttgcaatatggctgcagatgataaagataatgatgcacctccaacttcacaa
gaatcttcagataaagaggatccgttggagtcttcagataaagaggatctgttggaatct
tcagaatgctcttcttatacatctatggatgatgttgaagctgagagtgctacagcttgt
gacaatttgtctggtttcacatcatactgtacaagtacaggtgaagcaaaatgttccttg
gtaaccagaaagctgctttcttccgatgccggttcagttcaccatgggatcaattgtgtc
agccctattgatgaatgcgagaaagatggcaagttgtattgcagacatgttcctatgcac
tcacagaatactaagcataatgtggtgcctgatgctttagaactggattatcagtatagt
cagttctcaccatttgacaggtttatgaaaagaaccagttgctcgtctgaaaaaatgaat
ttggttgaggagttcttatataccgaccataacagttcattagagaaagcatcacatggt
aatgtagattatccattacattctgattcagggtcttctagactactgaacagtaaaaac
tatgagaagtctggtaagataaatcaagtatggaatactagtattccttacaatcttagt
gtcaaccccatactgaagaatgcagcttgttgtcatacggagagcgatttacaacataaa
agcaagaactgggcacttggcagctttgatttcgagtctgtcaaagatccatgtgaagta
tattgtggaaggaacccatccttccctgttgagtctgtaaatggagcagcaacagttgta
cagcccagtacagcctttcaacagcctgattgttccagaatgattcttcaagctcaggca
agaagtcaggcataccctactccctcagaagaaatggcagcaagagatagtattcaggaa
aatgcttctggtggggcattctgggagaaatcattacaatataatgataaatcaaaagaa
aaaacagctgtagattttaatccacagcttgatatgccccttgatatagttattgacaag
tgcattatacaagaagttttgcttcaatataaatatgttagcagcttcacaatgaagttt
cttgaggagggttttgatctttatgcacatctgctagctctgcggcgatatcatttcatg
gaattagctgactgggctgattcctttatttgttcaatttatcataagaaatggtcattt
gttaagtctgagcagaaaagagcagagatccaagggattatgaacttggctttgcaaagg
tcttcatgtgattctgatccttataaggaaagattgtttatatacatcagagagcaaccc
actgtttcttgtgatgcctctgcatgtggtcttgatttgctggatgaaatcttgttgggt
tacaaagctgaatggccagtgaatattgtcattgcagaagacacagtcaaaatatattct
gaaatattctgctatcttcttcaagtcaggtttgcagtgttttcactaactgaagtatgg
agatttctaaaggagttaacacagttcattggtcgctccaaccatagtacacctgatgtc
ttcaagaaattgaactttgtaatgagagtgaggcatacaatttatcactttctatcaaca
ctacagcagtatctccattgccatttatctgatatatcatggcgtcgttttcaacattcc
cttaaaaatcaggtgagagatatactggatctggagtatgtgcatatgtgttatattaac
gatgcacttgacatatgtttcttgtctgatggatcaaaacaagttgccacgataatcaaa
agcatgctgcagctggctttggagttacgatcatgttttcagactcttgatggcactagt
gatttatcagtaactcaactcagtaatcttcactctcttataaacttctctcaggtggat
gcaattggaacgaggtttgacggtaacatcaaagatttgtatattttgcattctaagtct
tcgaaatatggggagcttggcctttcccgtttctgggggtatctgaattacaatgagtac
cattctacaaaaaacagtatggatatgggcagcttctgtttttga
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