Panicum virgatum (switchgrass): 120681548
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Entry
120681548 CDS
T07260
Name
(RefSeq) tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120681548
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120681548
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Gene cluster
GFIT
Motif
Pfam:
Gcd10p
Motif
Other DBs
NCBI-GeneID:
120681548
NCBI-ProteinID:
XP_039819000
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Position
7N:41341826..41346575
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AA seq
473 aa
AA seq
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MEPPPPPAAIPREAWEGCSVLLDINDGDRLAFFRLTPAATVKIGNKTCSLQPLVGRPFGS
LFRVGADGLVPCAAADAPSRDDSMQDGADGQVRDETRDNRSLVDNNTAQNLSSDDIEAMK
RDGATGDEIVEALIANSSTFGKKTVFSQEKYKLKKQKKYAPKVLLRRPSTRSICETYLKK
SPARIGFMRVDTLSLLLSMANIGPYSDVLVVDMVGGLIVGAVAERLGGTGYVCSTYLGTA
PSSIDIIRMYNLSSDMVSRIVQVPLSELCSIQSSGNTPSVLNGNAEGEVVEPAVVQDEDA
QASLAQAVDTADEKAQLSTEQTTDMEVSNPSLDVQDENSSFECKGGDGDSIASKSKPGKA
PSPEKMKYWNEHGFSSLIVAAPSHEVESFVADLLPLLSYSAPFAIYHQYLEPLAKCMHTL
QVSKRAIGLQLSEPWLREYQVLSSRTHPHMQMNAFGGYILSGMRIQSEQVSHQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggagccgccaccgccgccagcggcgattccccgggaggcgtgggagggctgcagcgtc
ctcctcgacatcaacgacggcgaccgccttgccttcttccgcctcacccccgcagcgacg
gtgaagatcgggaacaagacctgctcgctgcagccgctcgtggggcgccctttcggctcc
ctcttccgcgtcggtgctgacgggctcgtcccctgcgccgccgcagatgccccatcccgt
gatgatagcatgcaagatggtgccgacggccaagtgagggatgaaaccagggacaatagg
tccctggttgataataatacagcccagaatttatctagcgatgacatagaggcaatgaag
agggatggtgcaactggtgatgagattgtggaagctttgatagcgaatagttcaacattt
ggaaagaaaactgtattctcacaagagaaatacaagttaaagaaacaaaagaaatatgcg
cctaaagttcttttgcgacgcccctctacccgaagcatttgcgagacatacttaaagaaa
agtccagctcgaatagggtttatgcgagttgacacactatcgctcttattgtctatggca
aacattggtccatattcagatgtgcttgtggttgatatggttggaggcttaattgttgga
gctgttgctgaacgtttaggaggtacaggatatgtttgcagcacatatcttggtacagca
cccagctccatagacattataagaatgtacaatctgagcagtgatatggtcagcaggatt
gttcaggtgccacttagtgaactatgctcaattcaaagttctgggaataccccttctgtt
ctcaatggtaacgctgaaggggaggtggtcgaacctgctgtagtacaagatgaggatgca
caggcatctctagcacaggcagttgacacagcagatgagaaggcgcagttatcaacagaa
caaacaactgatatggaggtctcgaacccttctttggatgttcaagatgaaaactcttca
tttgaatgcaaaggtggtgatggtgattcaattgcctccaaatctaaacctggaaaagca
ccatcaccagagaagatgaaatattggaatgaacatggctttagcagtttaattgttgct
gccccgagccatgaggtagagagttttgttgctgatctgcttccgttattgtcttattca
gctccgtttgctatctatcatcaatatcttgagcctcttgcaaagtgcatgcacaccttg
caggtatcaaaaagggctattggattgcagctttcggaaccctggctacgtgaataccag
gtgctttcatcacggactcaccctcacatgcaaatgaatgcatttggcggttatatcttg
agtggcatgaggattcaaagtgaacaagtgagtcatcaataa
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