Panicum virgatum (switchgrass): 120681556
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Entry
120681556 CDS
T07260
Name
(RefSeq) beta carbonic anhydrase 5, chloroplastic-like
KO
K01673
carbonic anhydrase [EC:
4.2.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00910
Nitrogen metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
120681556
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.1 carbonic anhydrase
120681556
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Gene cluster
GFIT
Motif
Pfam:
Pro_CA
CXXC_Zn-b_euk
YidB
Motif
Other DBs
NCBI-GeneID:
120681556
NCBI-ProteinID:
XP_039819014
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Position
2K:complement(48434117..48438341)
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AA seq
308 aa
AA seq
DB search
MANGLLLRAASPGLRPAVAGAAGSSADSGRGHGVVTIGDSRPRVGALRVGGSSRREFSFI
TTAAKDHSVLTRQLLDSRHDTVDEVGTEHDPFIELKARFMDFKQRNYVEKISNYQSLAQQ
QTPKFMVIACADSRVCPTSILGFQPGEAFTVRNVANLVPPYEHGGSETSAALEFAVNTLQ
VENVLVVGHSRCGGIQALMSMKDDSTSGSFIKNWVSIGKSARLSTKAAAGNLSFEMQCTH
CEKESINSSLLNLLTYPWIEKRVNEGTLNLHGGYYNFVDCTFEKWTLVYREGLKGGSKYA
IKNRSSWS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgggctcctcctccgcgccgcctccccgggcctccgccccgccgtcgcggga
gcggccggctcctccgctgactccggccggggacacggcgtggtgacgatcggcgattcg
aggccgcgcgttggtgctctgcgggtgggaggatctagccggagagaattctcatttatc
acaacagccgccaaagatcattctgtcttgacccggcaacttctagattcgcgacatgat
acagtagatgaagtaggtacagaacatgatccgttcattgagttgaaagcgaggttcatg
gacttcaaacagcgaaactatgtggaaaaaatttcaaattaccaaagtttggcgcaacag
caaacaccaaagttcatggtgattgcttgtgctgactccagggtctgccctaccagtatt
ttggggtttcagcctggggaagcatttacagttcgtaatgtggcaaatttggtaccacca
tatgagcatgggggttcagagactagtgcagcactagagtttgctgtcaatacactccag
gtagaaaatgtattggtggtaggtcacagccgatgtggtggcatccaggcactaatgagt
atgaaagatgattcgacctctggaagctttattaagaactgggtttcaattgggaagagc
gcaaggttaagcacaaaagctgcagctggaaacttgagttttgaaatgcagtgcacacat
tgtgaaaaggaatcaataaatagctctcttttgaacttgttaacatacccatggatagag
aaaagggtgaatgaaggtactctgaaccttcatggaggctactacaactttgtagattgc
acatttgaaaaatggacattagtgtaccgtgaaggactcaaaggcggaagcaagtatgct
ataaagaacaggtcatcctggtcttga
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