Panicum virgatum (switchgrass): 120681585
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Entry
120681585 CDS
T07260
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120681585
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120681585
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120681585
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120681585
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120681585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
120681585
NCBI-ProteinID:
XP_039819061
LinkDB
All DBs
Position
2K:complement(48497188..48509136)
Genome browser
AA seq
900 aa
AA seq
DB search
MEVSAAVALVVAVALMALGMAASAWLQRAEARREEVRRLAWQAAEEVEIAEREEAYCYGQ
YGGVFVRASDVPEARPAPNEAEDEVAVVAAAPAPAPAAAAAAAAAAAAAASPPAGKGVCA
MCARPTTLRCKRCKSVKYCTFKCQIDHWRKGHRDECHPPGLGATRDGTPENVVARVELKD
MPSDKPSNAAESSAEYSQFTGKAELVDCSRLTTTSEACKVHDNAVHEKNSLTTHDQHTEL
ESEMEQSNKQAIGTVNHESSRNLPCMSAVDKVSSTHSHSSADGLSCNPSKRGDNSPGLCA
RPDSTGVVPNNPSIEKKYARQQTAPKVVRHYPTELALFPFKHFIELYNFEKLELHPFGLC
NLGNSCYANAVLQCLAFTRPLTAYLLEGYHSRNCSKKEWCFMCELEKVLAEGKRGNAPVS
PTGILSHLNEIGTSFGQGREEDAHEFLRYAIDTMQSASMKEAKKNGVHKLAEESTLVQLT
FGGYLQSKIICTKCQVSSAQSERILDLTVEIDGDVNTLEGALRRFTSSEVLDGDNRYHCS
RCMSYERAKKKLTISEAPNILTIALKRYQSGVFGKISKDVKFPEHLNLSQFMCKTDDYSP
VYSLYAVVVHHDVMNTTISGHYVCYVKDPQGKWHEMDDRKVKPVSLKKVLSKCAYMLLYA
RCSPRVPESVRKAMLKQGASHAKKPKEMADSGSTPLGGIYVSMHRGGELWKDHAVHNHTH
TSEASDAWSYQVPGFSRSDSSSLFSNSDAGSSSTLSSNSTNSTRNLGNMEYDNISGASDH
MHPVSSSVIPEEDELSYLRQRSSCNPSSSGHDIDQAGEFAQQYHHRLQVGRGVLEDGGEN
PSSFYTDQGKQQGSSSRNRSFSRNCKLTEQRRYTGAAFFLEGQLGRGLSRHFTGRGGLGL
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtcggcggcggtggcgctggtggtcgccgtcgcgctcatggcgctcggcatg
gcggcgagcgcgtggctgcagcgcgcggaggcgcggcgggaggaggtgcgccgcctcgcg
tggcaggcggcggaggaggtcgagatcgccgagagggaggaggcctactgctacggccag
tacggcggcgtgttcgtccgcgcctccgacgtccccgaggcgcgccccgcgccgaacgag
gcggaggatgaggttgccgtggttgctgctgctcctgctcctgctcctgctgctgctgct
gctgctgctgcggcggcggcggcggcggcctcccctccggcggggaagggcgtctgcgcg
atgtgcgccaggccgacgacgctccggtgcaagcgatgcaagagcgtcaagtactgcacc
ttcaaatgccaaatagatcactggagaaaaggacacagagatgaatgccatccaccaggt
cttggtgccacacgagatggtacaccagagaatgtggtggctcgagtagagctcaaggat
atgccctctgataagccgtcaaatgcagcagagtcctctgcggaatattctcagtttact
gggaaggcagaacttgttgattgctcaaggcttacaactacaagtgaagcttgcaaagtt
catgacaatgctgttcatgaaaaaaattctctcactactcatgaccagcatactgagttg
gagagtgaaatggagcaatccaacaagcaagctattggaacagttaaccatgaaagctct
agaaatttgccatgcatgtcagctgttgacaaagtttcttccactcacagtcacagtagt
gcagatggtttatcatgcaacccatctaaaaggggagataactcgcctggtctatgtgca
aggccagatagtacaggagtggtgccaaataatccatcaatagaaaagaaatatgccaga
caacaaacagctccgaaagttgtgaggcattatccaacagaattggcactttttccattc
aaacacttcatcgaactctacaacttcgagaagttggaactgcatccttttggtctatgc
aaccttggcaatagctgctatgcgaatgctgttcttcagtgtttggcatttacccgacca
cttacagcctatcttttggaaggatatcattcacgaaattgttccaaaaaggaatggtgt
ttcatgtgtgagttggaaaaggtcctggcagagggcaagcgtggaaatgctccagtatca
cctactggaatactatctcatctgaacgaaattgggactagctttggccagggtagagaa
gaagatgctcacgaatttctaaggtatgcaattgatactatgcaatctgctagcatgaag
gaagcaaagaaaaatggtgtccacaagctagctgaagaatcaactctggtgcagttaaca
ttcgggggctatctacaatccaagataatatgcacaaagtgtcaggtcagttcagcacag
tctgaacgtattttggatttaactgttgaaatagatggggatgtcaatacccttgaaggt
gcacttcgtcggttcacatcttcagaagttttagatggtgataatagataccattgtagc
agatgcatgtcttatgagcgtgccaaaaagaagttgacaatatcagaggcgccaaatatt
ctgacaatcgcactgaaaagatatcagtctggtgtttttggtaagatcagcaaggatgtc
aagttcccagagcacttgaatttgtctcaattcatgtgcaaaacagatgattatagtcct
gtgtacagcttgtatgctgtggttgtccatcatgatgttatgaatacaaccatctctggt
cattatgtatgttatgtgaaggatcctcaggggaagtggcacgagatggacgatcgcaag
gtgaaacctgtttctctcaaaaaggtcctgtcaaaatgtgcatacatgctgctttatgca
aggtgttcaccgcgtgtgccagagtctgtaaggaaagcaatgcttaaacaaggtgcatcg
catgctaagaaacccaaggagatggcagattcaggatccactcctttgggaggcatttat
gtgagcatgcaccgaggtggagagttgtggaaggatcatgcagtgcacaaccacacacac
acatcggaagcatccgacgcatggtcgtaccaggtaccaggctttagtcgaagtgacagc
tcttcactgttcagcaactctgatgcagggtcaagcagcactctcagcagcaatagcact
aacagcaccaggaacttgggtaacatggagtatgacaacatatctggagcctcggatcat
atgcacccagtgagctcatcggtaatacctgaggaagacgagctgagctacttgaggcaa
aggtctagctgcaaccctagctcctcaggccatgacatagatcaggcaggtgagtttgca
caacagtaccatcacaggcttcaggttggcagaggggttttggaagatggtggggagaac
ccatcatccttctacactgaccaaggtaaacaacagggtagcagtagtcgaaatcgtagt
tttagtaggaactgtaagttaacagaacagcgtaggtatacaggggcggcctttttctta
gaaggtcaactagggagaggattgtccaggcattttactggcagggggggcttgggtttg
tag
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integrated database retrieval system
