Panicum virgatum (switchgrass): 120681598
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Entry
120681598 CDS
T07260
Name
(RefSeq) transcription factor TGAL6-like isoform X1
KO
K14431
transcription factor TGA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120681598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120681598
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120681598
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
Motif
Other DBs
NCBI-GeneID:
120681598
NCBI-ProteinID:
XP_039819078
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All DBs
Position
7N:47044829..47053725
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AA seq
402 aa
AA seq
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MMELYPGYLEDHFNLHKLSIGAAASPPEYMTSASAVQFAAAPIRMGVYERPAPAPVMGMW
SSDPFKVDSGQATSGSTVMEADKFDTGLEDVPQVALEPARSTDQETSRPPERVLRRLAQN
REAARKSRLRKKAYIQQLETSRMKLAQLEQELQRARQQGAYANGNLGDPNLGFAGTMDPG
VAAFEIDYSNWVEEQNRHTAELRSALQGQTTELELRMLVETGLNNYEHLFRIKALAANSD
VFYVTSGMWKTPAERFFLWIGGFRPSEVLKILRPQLEPLTEAQLMAVGGLQHTSTQAEDA
LSQGMEKLQQNLAETLTAAADPFGPPDGYMLQMMATAVEKLKELVGFVTQADHLRQTMLQ
QMHKILTTRQAARGLLALGDYFQRLRALSHLWATRPRESAIS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctctaccctggataccttgaagatcatttcaaccttcacaagcttagcatc
ggcgccgccgcctccccgccggagtacatgacctctgcgtccgcggtgcagttcgcggcg
gcgcccatcagaatgggggtgtacgagcggccggcgccggcgccggtgatgggcatgtgg
agcagcgatccgttcaaggtcgacagcggccaggccaccagcgggtccaccgtcatggag
gcggacaagttcgacactgggctagaagatgttccacaggtagcactggagccggcaaga
agtacggatcaggaaacaagcaggccgccagagagggtcctaagaagacttgcacagaac
agagaggctgctcggaagagccggctgagaaaaaaggcctacatccagcagctagagaca
agccggatgaagctggcacaactagagcaagagcttcaacgggctcgacagcagggtgca
tatgcaaatgggaatttgggagacccaaatctcggtttcgcaggaacaatggatccaggt
gttgctgcgttcgagatagactacagcaactgggtggaagagcagaacaggcacacagcc
gagctgaggtcggctctccaggggcagaccacggagctcgagctgcgcatgctcgtcgag
accgggctcaacaactacgagcacctgttcaggatcaaggcgctggccgccaactccgac
gtgttctacgtcacgtccggcatgtggaagacccccgccgagcgcttcttcctgtggatc
ggcgggttccggccgtcggaagtgctcaagatcctgaggccgcagctggagccgctgaca
gaggcgcagctgatggccgtgggcggcctgcagcacacctcgacgcaggccgaggacgcc
ctgtcgcagggcatggagaagctgcagcagaacctcgccgagacgctgacggccgcggcc
gaccctttcgggccccccgacggctacatgctgcagatgatggcgaccgccgtggagaag
ctgaaagagctcgtcggcttcgtgacccaggcggaccatctccggcagacgatgctgcag
cagatgcacaagatcctgacgactcggcaggcggcgaggggcctcctggcgctcggcgac
tacttccagcgcctccgcgcgctcagccatctgtgggcgacgcggccccgcgagtcggcg
attagctag
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