Panicum virgatum (switchgrass): 120681609
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Entry
120681609 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 2-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120681609
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120681609
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GFIT
Motif
Pfam:
BACK_BPM_SPOP
BTB
MATH_2
Motif
Other DBs
NCBI-GeneID:
120681609
NCBI-ProteinID:
XP_039819105
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Position
7N:46408005..46409798
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AA seq
393 aa
AA seq
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MDARSVAGPPQPPIASSSLLDTAHHGGGSAFPDVFCLPRTSSTSLTKSVTAVHDFKVTDY
SLLDGMGVGRYVSSSTFAAGGRDWAVRFYPDGATAGCLGHVSAFLYCFSRQPAAGVRARF
TLNLLETDGRMSQQATNPYMKHTFSPASDNWGFIKFIEKSKLLTGSPYLHKDSLTIRCVL
TVVIDSRTVEDELNSVVVPPPNLHQDFGEMLKDGEGADVTFTVDGQSFRAHRCVLAYRSP
VFRAELFGPMKEKATSCIRIDDMEPSIFEALLHFIYTDRLPDSCNDGRNAAMQHLLVAAD
RYGVERLRLMCESKLSEAIDVETVATTLALSEQHNCSQLRRACIGFMASPNMLGPIMETD
GFNHLVASCPLVLKEILDKMSSIWSESAPVTCE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagatcggtcgcggggcctccgcagccgccgatcgcgtcgtcgtccctcctc
gacacagctcatcacggcggcggctcggctttcccggatgtcttttgcctgccgaggacg
tcgtcgacgagcctgaccaagtccgtcaccgcggtgcacgacttcaaggtgaccgactac
tcgctgctcgacggcatgggcgtcggcaggtacgtcagctccagcaccttcgccgccggc
ggccgcgactgggccgtccggttctacccggacggcgccacggcgggctgcctcggccac
gtgtccgccttcctgtactgcttcagccggcagccggcggccggcgtcagggcccggttc
accctcaacctgctcgagacggacgggaggatgtcccagcaggcgaccaacccctacatg
aagcacaccttctctccggccagcgacaactggggcttcatcaagttcatcgagaaatcc
aagctgctgacgggctcgccgtacctccacaaggacagcctgacgatcaggtgcgtgctg
actgtcgtgatcgactcccgcacggtggaggacgaactgaactcggttgtcgtcccgccg
ccgaacctgcaccaggatttcggagagatgctgaaagatggtgaaggggcagacgtgaca
ttcactgtggatggccaatcgttccgtgcccataggtgtgttctggcttaccggtctccg
gtgtttagagccgagctctttggtccgatgaaggagaaagctacaagctgcatcaggatc
gatgacatggagccatcaatcttcgaggcactcctccacttcatctacacggatcgtctg
ccagacagctgcaacgatggtcggaacgccgcgatgcagcacttgctagttgccgctgac
cggtatggagtagagaggctaaggttgatgtgtgagagtaagctcagcgaagccattgat
gtggaaacggtggcgacgacactagccttatcagagcagcacaactgctcacagctgcga
cgagcctgcattgggttcatggcctcgcccaacatgcttggcccaatcatggaaaccgac
ggattcaatcatcttgttgcaagctgccctttggttttgaaggagattttggacaagatg
tcaagcatttggagtgaatcagcaccggtgacctgtgagtga
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