KEGG   Panicum virgatum (switchgrass): 120681789
Entry
120681789         CDS       T07260                                 
Name
(RefSeq) WD repeat-containing protein 25-like
  KO
K24742  WD repeat-containing protein 25
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pvir04990]
    120681789
Domain-containing proteins not elsewhere classified [BR:pvir04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   120681789
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_RFWD3 Beta-prop_WDR75_1st eIF2A Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_VPS8 VPS8_N Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_NOL10_N WDR54
Other DBs
NCBI-GeneID: 120681789
NCBI-ProteinID: XP_039819319
LinkDB
Position
7N:50575910..50580316
AA seq 447 aa
MDLLSAAYGTTSDEDEGEPPSSTPIATALTSFGPPPVKRPRWEYQYQPYLPPPSSFPQPP
LSKAAPPPPSPASGRYVSKRERALLAASRAPVDAASLLPPQTTAEIDSSVGSITDSNLRA
DILHSLRCQPKPGSSRSLPSKLSVSLKGHTKAINCIDWSPTHAHLLTSAGMDHTVHVWNV
WDKGNTIARVLKHHTAAVKDVRWSPHSLSLLSGGLDCSVQLIDVVEGRVIKVFKEDQAVE
VIKFNPSNPNLFLSGGSKGSLRLWDIRSGLVIKEFHKSLGTILDIEFSADGKQFISSTDT
TRSNISENTIIVWDVLRQVPLSNQVYTEAFTCPCVRYHPHEASFVAQSNGNYIAIFSARS
PFKLNKYMRFEGHGVWGFPIKCNFSRSGRELASGSSDGSIYFFDYKSGRPLLKIEAFKEA
CTDVVYHPVIPNVIASCSWTGEISIFE
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggatctcctctccgctgcgtacggcactacctccgacgaggacgagggcgagccgccc
tcctccacaccaatcgccaccgcgctcacctccttcggaccacctcccgtgaagcggccg
cggtgggaataccaataccaaccatacctccctccaccctcgtccttcccgcagccgccc
ctatccaaagcagcgccgccgccgccatctccagccagcggcaggtacgtctctaagagg
gagcgcgccctcctggctgcatctcgtgcacccgtggacgccgcatcgctccttcctccg
cagacaacagcagagatcgattcctcagttggctccatcaccgattcaaatctgcgagct
gacattttgcattccttgcgatgccaaccaaagcctggatctagcagaagtttaccttca
aagctctcggtttctttaaagggtcacacaaaggcaataaattgtatagattggtcgcca
actcatgcacatctactcacttctgctggaatggatcatacagtccatgtatggaacgta
tgggacaaagggaatactattgctcgtgttttgaagcatcacactgctgctgtgaaggat
gtgaggtggtcccctcatagcctctctttactttctggagggctcgattgttccgtacag
ctaattgatgttgtggaaggaagggtaatcaaagtattcaaggaagatcaagctgtggag
gttatcaagttcaacccaagtaaccccaatctcttcctatctggtgggtccaagggttct
cttaggctatgggatattcgaagtggtctggtaataaaagaatttcataaaagtcttggg
accatccttgacatcgaattcagtgctgatgggaaacaatttatctcttcaacggacaca
accagaagcaatattagtgagaacactataattgtctgggatgtcctgcgacaagttcct
ttatctaatcaggtttatactgaagcattcacatgcccatgtgtaagataccacccgcat
gaagcttcttttgttgcacaatcgaatgggaactacattgcgattttttcagcaaggtca
cccttcaagctgaacaagtatatgcggtttgaaggacatggagtttggggtttcccgata
aagtgcaatttttctcgaagtggaagagaacttgcatccggttcgtcagatggatccatt
tacttttttgattataaatcaggaaggcctttactgaaaatagaagcattcaaagaagcc
tgcactgatgttgtataccaccctgtaataccaaatgtgattgcttcatgtagctggacc
ggtgaaatatctatttttgagtga

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