Panicum virgatum (switchgrass): 120681838
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Entry
120681838 CDS
T07260
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120681838
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
120681838
Peptidases and inhibitors [BR:
pvir01002
]
Serine peptidases
Family S54: Rhomboid family
120681838
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Serinc
Epiglycanin_C
Motif
Other DBs
NCBI-GeneID:
120681838
NCBI-ProteinID:
XP_039819411
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All DBs
Position
7N:41773531..41775524
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AA seq
342 aa
AA seq
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MSNPDVEAGGPARAAPATTGIKPPPGRYSMAGNGNGSAPYVAPSPFYYDNAAAHERHHWS
WLVPLVVIANVAMFVVVMFANNCPRGGGDCVGRGFLRRFSFQPLKENPLLGPSAATLQKY
GALDWYKVVHGNQAWRLESCTWLHAGLIHLLANMISLIFIGVRLEQQFGFWKVGLVYLVS
GFGGSVLSVLFIRKGVSVGASGALFGLLGAMLSELITNWTIYTNRFAALVNLIIIAAINL
AVGMLPHVDNFAHIGGFATGFLLGLVLLIQPQFGWLEQPFGAKSKSKYKAYQIILLLLAL
VLLAAGFAVGLVMVFRGENGNDHCSWCHYLTCVPTSSWKCDN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgacgtggaggcgggcggcccggcgcgggcggcgccggcgacgacgggg
atcaagccgccgccggggcggtacagcatggccggcaacggcaacggcagcgcgccgtac
gtggcgccgtcgccgttctactacgacaacgcggcggcgcacgagcggcaccactggtcg
tggctggtgccgctggtggtgatcgccaacgtggccatgttcgtcgtggtcatgttcgcc
aacaactgcccgcgcggcggcggggactgcgtcggccggggcttcctccgccgcttctcc
ttccagccgctcaaggagaaccccctcctcggcccttccgccgccacgctgcagaagtac
ggcgccctcgactggtacaaggtcgtgcacgggaaccaggcgtggcggctggagtcgtgc
acctggctgcacgccggcctcatccacctgctcgccaacatgatcagcctcatcttcatc
ggcgtccgcctcgagcagcagttcggattctggaaggtcgggctggtgtacctcgtctcg
ggcttcggcgggagcgtgctctcggtgctcttcatcaggaagggcgtctccgtcggtgcc
tccggcgcgctcttcggcctcctcggagcgatgctgtcggagctcatcaccaactggacc
atttacaccaacagatttgcagcgttggtgaacctgatcatcatcgccgccatcaacctg
gcggtgggcatgctcccccacgtcgacaacttcgcccacatcggcggcttcgccaccggc
ttcctcctcgggttagtgctgctgatccagccgcagttcgggtggctggagcagcccttc
ggtgccaagtccaagtccaagtacaaggcgtatcagatcatcctcctgcttcttgcactt
gtcttgctggctgcagggtttgctgttggattggtcatggtgttcaggggagagaacggc
aacgatcactgcagctggtgccactacctcacctgcgtgccgacgtcaagctggaagtgt
gacaattga
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