Panicum virgatum (switchgrass): 120681843
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Entry
120681843 CDS
T07260
Name
(RefSeq) transketolase, chloroplastic-like
KO
K00615
transketolase [EC:
2.2.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00030
Pentose phosphate pathway
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
pvir_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
120681843
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120681843
09109 Metabolism of terpenoids and polyketides
01051 Biosynthesis of ansamycins
120681843
Enzymes [BR:
pvir01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.1 transketolase
120681843
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Gene cluster
GFIT
Motif
Pfam:
Transketolase_N
Transket_pyr
Transketolase_C_1
Transketolase_C
E1_dh
Motif
Other DBs
NCBI-GeneID:
120681843
NCBI-ProteinID:
XP_039819414
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Position
7N:20962450..20966243
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AA seq
720 aa
AA seq
DB search
MAAPPTPKTSAAASPGSGCGGVRLLRSSAHSRLPFASAARPGGRPATALRARALPAPPEL
VEQSVNTIRFLAVDAVEKAQSGHPGLPMGCAPLGHILFDEFLRFNPKNPAWFDRDRFVLS
AGHGCMLQYALLHLAGYDGVTIDDLKAFRQWRSRTPGHPENFETPGVEVTTGPLGQGFAN
AVGLALAEKHLAARFNKTDLKIVDHYTYVILGDGCQMEGVSNEAASLAGHWGLGKLIAFY
DDNHISIDGNTDIAFTEDVLARYEALGWHTIWVKNGNMGYDDIRAAIKEAKGVKDKPTLI
KVTTTIGFGSPNKANTYSVHGSALGSKEVEETRSNLQWLHEPFHVPDEVKRHWSHHTDEG
ASLEAEWNAKFAEYEKKYHQEAAELKSIMSGELPSGWDNALPTYTPENSPDATRNLSQQC
LNSLAKVIPGFLGGSADLATSNMTLLKMFGDFQRDTPEERNIRFGVREHGMGAICNGIAV
HSPGLIPYCSTFFVFTDYMRAAIRLSGLSESGVVFVMTHDSIGLGEDGPTHQPVEQLFSF
RAMPNILMLRPADGNETSGAYKIAVLDRKRPSIIALSRQKLPQLKGTSVDAVSKGGYIIS
DNSSGYKPDLLLIGTGSELEIAEKAADELRKQGRTVRVVSLVCWELFEEQTEKYKESVLP
SDVTSRISIEAGVTFGWEKYIGQKGKAIGIDCFGVSAPAGKIYKELGLTVENVIAAAKAL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaccaccgacccccaaaacctccgccgccgcgtcgcccggctccggctgcggc
ggcgtccgcctcctccgctcttccgcccactcccgcctcccgttcgcctccgcggccagg
cccggcggccggccggccaccgcgctgcgcgccagggccctgccggcgccgcccgagctg
gtggagcagtcggtgaacacgatccggttcctggcagtggacgccgtggagaaggcgcag
tcgggccacccgggcctccccatggggtgcgcgccgctgggccacatcctgttcgacgag
ttcctccgcttcaacccgaagaaccccgcctggttcgaccgcgaccgcttcgtcctctcc
gccggccacgggtgcatgctccagtacgcgctgctccacctcgccgggtacgacggcgtc
acgatagatgacctgaaagcttttcgacagtggagaagcagaactcctggccatccagag
aatttcgaaacacctggagttgaagtcaccactggtcctctgggacaaggcttcgcaaat
gctgttggactagcacttgctgagaaacatcttgccgctcgtttcaacaagactgatctg
aaaatcgtggaccattacacgtatgtaatccttggggatggttgccagatggaaggtgtt
tcgaatgaagcagcctctcttgctggtcattggggccttggaaaattgattgctttctat
gatgataaccacatatcaattgacggcaatacagatattgcgttcactgaagatgtgctt
gcccgttatgaggcgcttgggtggcatacaatctgggtgaagaatggaaacatggggtat
gatgacattcgtgctgcaatcaaggaagcaaagggagttaaagataagccaactcttatc
aaggtgacaaccacaattggttttggatctccaaacaaggcaaacacatatagcgttcat
gggagtgctttaggatccaaagaagtagaggaaactagaagcaatcttcaatggcttcat
gagcctttccatgttccagatgaggtgaagaggcactggagtcatcatactgatgaaggt
gcttctcttgaagctgaatggaatgcaaagtttgcagaatatgaaaagaaataccatcag
gaggctgctgagttaaagagcataatgtcaggggaactgccttcaggttgggacaacgct
cttccaacctatactcctgaaaactctcctgatgctactaggaacttatctcagcagtgc
ttgaattcacttgcgaaagtaatacctggttttcttggaggtagtgctgatcttgcaaca
tcgaatatgacattgcttaagatgtttggtgacttccagagggatactcctgaagagaga
aacattcgtttcggtgtgagagagcacgggatgggtgccatttgtaatggcattgcagtt
catagccctggcctgataccatattgttctacattctttgtgttcactgactacatgaga
gctgccatccgcctttctggtttaagtgaatctggagtggtcttcgtgatgactcatgac
tccattggccttggagaagatgggccaacccatcagcctgttgagcagttattcagcttc
cgagcaatgcctaacattttaatgcttcggcctgctgatggaaatgagacatctggggct
tacaagattgcggttcttgataggaaaaggccctctatcattgccctctcacgacagaag
cttccacagctgaaaggaacatcagttgatgctgtttctaaaggagggtatattatttcc
gataactcatcaggctacaaaccagatcttcttctcattggcacaggttccgagcttgag
attgcagaaaaagcagcagatgagctgaggaaacaggggaggaccgtacgagttgtttca
cttgtttgctgggaattgtttgaagagcagacagagaagtacaaggaaagtgttctccca
agtgatgttacttctaggattagcattgaggctggggtcacatttggatgggagaaatat
atcggacagaaaggcaaagctatcggcattgactgtttcggtgtaagtgctccagctggg
aaaatatacaaggaacttggtttgacggtggaaaatgtcattgcagcagccaaggcccta
tga
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