Panicum virgatum (switchgrass): 120681850
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Entry
120681850 CDS
T07260
Name
(RefSeq) isocitrate dehydrogenase [NADP]-like
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00480
Glutathione metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
pvir01230
Biosynthesis of amino acids
pvir04146
Peroxisome
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120681850
09106 Metabolism of other amino acids
00480 Glutathione metabolism
120681850
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120681850
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
120681850
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Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-GeneID:
120681850
NCBI-ProteinID:
XP_039819419
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Position
7N:36426308..36432093
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AA seq
476 aa
AA seq
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MARASVSSSAAAAAAALLPLNPARGGSPLPSLLPARRLPAPGSGGAFRGISLRCYAAAAA
AVAEQGRIKVQNPIVEMDGDEMTRVIWSMIKDKLIFPYLELDVKYYDLGILNRDATNDEV
TVESAEATLKYNVAVKCATITPDETRVKVFKLKSMWRSPNGTIRNILNGTVFREPILCKN
IPRILSGWKKPICIGRHAFGDQYRATDMIIDGPGKLKMVFVPEGAEAVEFDVYDFKGPGV
ALSMYNVDESIRAFAESSMAMALSKRWPLYLSTKNTILKKYDGRFKDIFQEVYEESWKEK
FEENSIWYEHRLIDDMVAYAVKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLLSS
DGKTLEAEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHRAKLDKNDRLLDFTHK
LESACVETVESGNMTKDLALLIHGPKVSREFYLSTEEFIDAVAQQLRGKIQTPAAV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgcttcggtctccagctccgcggcggcggcggccgcagccctcctaccctta
aaccccgcccgcggcgggagccccctcccttccctgctccccgcgcgccgcctccctgcc
cccgggagcggcggcgcgttccgcggcatctcgctccggtgctatgcagccgccgccgcc
gcggtggccgagcagggccgcatcaaggtccagaaccccatcgtcgagatggacggggat
gagatgacgcgggtcatttggagtatgataaaggataagctcatcttcccgtatctggag
ctggatgtgaagtactatgatcttggaattctcaacagggacgccaccaacgatgaggtc
accgtggagagtgcagaggctacattgaagtataatgtagctgttaagtgtgcaacaatc
actcctgatgagactagagtcaaagtgttcaaactcaagtctatgtggcggagcccaaat
ggcacaataagaaatattctaaatggcactgtttttcgcgaacccatcttgtgtaaaaac
ataccacgtatattgtctggctggaagaaacctatctgcataggaaggcatgcatttggt
gaccagtatcgagcaactgatatgattattgatggtccaggaaagctcaagatggtattt
gtgcctgagggagctgaggcggtggagtttgatgtctatgattttaaaggacctggtgtg
gcattatcgatgtacaatgtggacgagtctattagggcttttgccgagtcatctatggct
atggcactttccaaaaggtggcctctttatctcagcaccaagaacacaatcctaaagaag
tacgatggcagattcaaagacatcttccaggaggtatatgaagagagctggaaggagaag
tttgaggagaactcaatatggtatgagcaccggttgattgatgacatggtagcctatgct
gtgaaaagtgagggtgggtatgtttgggcgtgcaaaaactatgatggagacgtccagagt
gatttcctggcccaaggttttggttctctgggtctgatgacatcagtgctgctgtcttct
gatgggaaaacattagaggctgaggctgctcatgggactgtcactagacatttcaggcta
catcagaaggggcaggagacgagcaccaacagtattgcctcaatatttgcttggactcgt
ggactagaacacagagcaaagctggataaaaatgataggctgctggatttcacacacaaa
cttgaatctgcttgtgttgagacggtggaatctggcaatatgacgaaggacctcgcactt
cttattcatggccccaaggtatcaagggagttctacctgagcaccgaggagttcatcgat
gctgttgctcagcaactgcgaggaaagattcagacaccagctgcagtgtaa
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