Panicum virgatum (switchgrass): 120681857
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Entry
120681857 CDS
T07260
Name
(RefSeq) mechanosensitive ion channel protein 1, mitochondrial-like isoform X1
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120681857
Transporters [BR:
pvir02000
]
Other transporters
Pores ion channels [TC:
1
]
120681857
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Msl2-3_C
Motif
Other DBs
NCBI-GeneID:
120681857
NCBI-ProteinID:
XP_039819432
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Position
7N:42438106..42445834
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AA seq
528 aa
AA seq
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MSGIAAIWRRSCQLSTSQSLMETFCCPSVSSGALRWFSSSAKCSRKPDITVVDQIKVVSW
YSAVNDVARTRRLPFSSHMDANWLIAPKSRHGALPCFLGISSFHGGYSSDTGIKPEASRS
TVTNVPSTESSEVGTAGGGEGSWIEILHNARKSTVDATTDAGKKVKELTDAVTPHVQQLF
DTYPNLEKVVVPLGGTLCGTMIAWLVMPIILRRLHKYTSQSPIAALLGNSTKKDVLYQTS
LWCALEDPAKYLITFMAFSEMATLIAPSISTYLPQAWRGAFVLAFVWFLHRWKTNFIAKA
MTNPDAPSVDRDRISAFDKVSSLGLIGLGVMGLAEACGVAVQSILTVGGVGGVATAFAAR
DVLGNILSGFSLQFSKPFSVNDYIKAGPIEGKVIEIGLTSTSLINPEKLPVIVPNSLFSS
QMIVNRSRADWRASVTKIPIRIEDIEKVPSVSEEIRVMLRSNPNVSNSDVPYCYLSRLES
SYGELTIGCNLKNMRKDEWLSAEQDILLGAARIIKSHGIELGSTMQCC
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggattgcagcaatttggcgtcggtcatgtcaattatctactagtcagagtcta
atggagacattttgttgcccatctgtgtcttctggtgctttgaggtggttcagcagctct
gctaagtgctcaagaaaacctgatattacagttgttgaccagattaaggtggtgagttgg
tattctgcagttaatgatgtggcaaggaccagaagactgcccttttcaagtcatatggac
gctaattggttgattgcgccaaagtccagacatggtgcattgccatgtttcttaggcatt
tcaagcttccatggtggatactcctcagatactggaatcaagccagaagcttctcggagt
actgtcactaatgttccttctacagaaagctctgaggttggcactgcaggtggtggtgag
ggttcttggattgagatcttgcataatgctcgcaagtctacagtagatgctaccactgat
gcaggcaagaaagttaaggaactgactgatgcagttacacctcatgtccaacagctattt
gatacatatccaaatcttgaaaaggtagttgttccacttggaggaacgctgtgtggtaca
atgattgcatggttggtcatgcctatcattctaaggaggcttcacaagtacacgtcacaa
agtcctatagcagcacttttggggaactcaaccaagaaagatgttttgtaccaaactagt
ctctggtgtgctttagaggatcctgcgaaatatcttatcacatttatggcattttcagag
atggccacacttattgcaccaagcatatcaacttatcttccacaggcatggaggggtgca
tttgtgctggcttttgtatggttccttcacaggtggaaaaccaacttcattgctaaagct
atgaccaacccagatgccccaagtgtggaccgcgacagaatatcagcatttgataaggtt
tcttcattgggactgattggactaggagtaatgggtcttgctgaagcttgtggtgtagct
gttcagtcaatattaactgttggtggtgtgggaggtgttgctactgcttttgctgctaga
gatgtccttggtaatattctcagtgggttctccttgcaattttctaagccattctcagtt
aacgactacataaaggcggggccaatagaaggcaaggtgatcgaaataggactcacttct
acttcattgatcaatccagaaaagctccctgtcatagtaccaaactctttgttctccagt
cagatgatagtaaacagatcacgagctgattggcgagctagtgtgacaaagattcctata
agaattgaggatattgagaaggttccgtctgtatcagaggagataagggttatgttaagg
tccaatccaaatgtgtccaatagtgatgttccttattgctatctctcaagattggaaagt
tcatatggagagctcaccattggatgcaacctaaaaaacatgagaaaagatgagtggcta
tctgctgaacaagatattcttttgggagctgctaggattatcaaatcgcatggcattgaa
cttggaagcactatgcagtgctgttaa
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