Panicum virgatum (switchgrass): 120681865
Help
Entry
120681865 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 16-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120681865
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120681865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Peptidase_C74
GNVR
Motif
Other DBs
NCBI-GeneID:
120681865
NCBI-ProteinID:
XP_039819440
LinkDB
All DBs
Position
7N:23232383..23236946
Genome browser
AA seq
480 aa
AA seq
DB search
MIPSMDEALLGNGVQKTRGVGENLVLPEVRKQLHLAGPLIAAWILQNIVQMISVMFVGHL
GELALSSASIATSFAGVTGLSLLSGMASSLDTLCGQAFGAKQYYLLGIYKQRAILVLTLV
SLVVAVIWSYTGQILLVFGQDPEIAAGAGSYIRWMIPALFVYGPLQCHVRFLQTQNIVLP
VMLSSGVTALNHLLVCWLLVYKIGLGNKGAALANAISYLTNVSILAIYVRLAPVCKNTWR
GFSKEAFHNIPSFLRLGVPSALMVCLEWWSFELLVLLSGLLPNPKLETSVLSISLNTGSL
AFMIPFGLSAAISTRVSNELGAGRPQAAHLATRVVMVLAIVVGILIGLAMILVRNLWGYA
YSTEEEVVKYISKMMPILAVSFLFDCVQCVLSGVARGCGWQKIGACVNLGAYYLIGIPAA
FFFAFVYHLGGMGLWLGIICALVVQMLLLLTITLCSNWEQEALKAKDRIFSSSLPVDMTT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgataccaagcatggatgaagcccttcttggcaatggtgttcagaagaccagaggggta
ggagagaacctggtgctgcctgaggtcagaaagcagctgcaccttgctgggccactcatt
gccgcatggatcctgcagaacatcgtccagatgatatctgtcatgtttgttggtcacctc
ggtgagcttgcactctccagtgcctccatcgccacctcttttgcaggtgttactggcctc
agcttattgtctggcatggcaagcagcttggacacactgtgtgggcaagcctttggggca
aagcagtactatcttctcggtatctacaagcagagggccatccttgttctcactctggtg
agccttgtggttgctgttatctggtcgtacactggccagatccttctagtctttggtcag
gacccagagattgcagctggagcagggagctacatccggtggatgattccagcgctgttt
gtgtacgggccactgcagtgccatgtccggttcctacagacgcagaacatagtccttcca
gtgatgctgagctcaggtgttacagcgcttaaccatctgctagtgtgctggctgctggtg
tacaagattggtctgggcaacaagggtgctgccttggccaatgccatttcgtacctgacc
aacgtctccatcctggcaatctacgtcaggcttgcaccagtctgtaagaacacctggaga
gggttctcgaaggaggcttttcacaacatccccagcttcttgaggcttggtgttccatct
gcactgatggtttgcttggaatggtggtcatttgagctcctggtgctgctttctggactt
ctcccaaacccaaagcttgagacatcggttttgtcgatttccttgaacacaggctcttta
gcatttatgattccttttgggcttagtgcagccatcagcactcgtgtttcaaatgagctc
ggtgctggacgaccccaagctgcccatctggctacccgtgtggtcatggtgctggctatc
gtggttggcatattaatcggactggctatgattttggttcgcaatttatggggatacgca
tacagtacggaggaggaagtggtgaaatacatctccaaaatgatgccgatcctggccgtg
tcattcttgtttgattgcgtgcagtgtgttctttcaggtgttgctaggggttgtgggtgg
caaaagattggtgcttgtgttaaccttggtgcgtactacctgattggaattccagcagcc
ttctttttcgccttcgtttaccatctaggtggaatgggactttggctgggaataatctgc
gcactcgtcgtccagatgctattgcttctcacaattactctgtgcagcaactgggagcaa
gaagctttgaaggcaaaggacagaattttcagttcatccctaccagtagacatgacgaca
tga
DBGET
integrated database retrieval system
