KEGG   Panicum virgatum (switchgrass): 120681873
Entry
120681873         CDS       T07260                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120681873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120681873
Enzymes [BR:pvir01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120681873
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120681873
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-rbx1 Prok-RING_4 FANCL_C
Other DBs
NCBI-GeneID: 120681873
NCBI-ProteinID: XP_039819454
LinkDB
Position
7N:complement(38671093..38674722)
AA seq 255 aa
MDQPCMAAINSQPLVADVEVVKKASGDMPATMGSGCFDCNICLDFAAEPVVTLCGHLYCW
PCIYEWLRPGMESTASDNSSSARRQCPVCKATLSPDTLVPLYGRGGSSKKSLNGVSIPRR
PMVHRETVEHHNTQSNVNDQHHHQSMETNPPHQPLRHEHYHPSPTGFDFIYPPAPLGRGL
IHSTAGGVLGGMAEAVLPLVLGGQLPASMYYTSPYHVAAQNVNPRLRRHQMEIERSLHQI
WFFLFVFVVLCLLLF
NT seq 768 nt   +upstreamnt  +downstreamnt
atggatcagccttgcatggctgctatcaatagccaacctttggtggctgatgttgaggta
gtgaagaaagccagtggggacatgcctgcaacaatgggaagtggatgcttcgactgcaac
atctgccttgattttgcagcagaacctgtggttaccctctgtggtcacctttactgctgg
ccttgtatctatgagtggctgcgccctgggatggagtcaactgccagtgacaacagcagc
tcagcaaggcggcagtgccccgtatgtaaggcaacactctccccggatacactagtacca
ctctatggccgtggagggagctcaaagaaatcgctgaatggcgtgtccatcccgcgccgt
cccatggtgcaccgggagactgttgagcatcataacacacagagcaatgtcaatgaccag
caccaccaccagagcatggaaaccaaccctccgcaccagccattgcggcacgagcactac
catcccagtcccactgggttcgacttcatctaccctccggcaccactaggacgtggcttg
atccactcaactgccggaggggtgctcggagggatggcagaggctgtgctcccgttggtg
ctcggtggccagcttccagcaagcatgtactatacgagcccttaccatgtcgcggcacag
aacgtgaatcccaggctaaggcggcatcagatggagattgagaggtccctccaccagatc
tggttcttcctcttcgtgttcgtggtgctgtgcttgctcttgttctga

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