Panicum virgatum (switchgrass): 120681975
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Entry
120681975 CDS
T07260
Name
(RefSeq) RNA cytosine C(5)-methyltransferase NSUN2-like
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120681975
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
120681975
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120681975
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Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
120681975
NCBI-ProteinID:
XP_039819610
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Position
2K:49106400..49115900
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AA seq
863 aa
AA seq
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MGGGRKRGRTQRRHFKQGRENVWKHNPQRPPAGEAGEGREGNPSWQPFATENPAFEEYYK
EQQIIPEEEWDDFISMLRKPLPATFRINASCQFFQDICSQLENDFRKSLETEVSDEHGED
AIRPLPWYPGNLAWHLNFSRMQLRRNQALESFHEFLKRENEVGNITRQEAVSMVPPLFLN
VQPDHHILDMCAAPGSKTFQLLEMIHQSTKPGLLPNALVVANDVDVQRCNLLIHQTKRMC
TANLIVTNHEAQNFPGCNLAKFCSETCMDEAKLQRLEFDRVLCDVPCSGDGTVRKAPDMW
RKWNAGMGNGLHRLQVEIAMRGMGLLKVGGRMVYSTCSMNPVENEAVVAEILRRCGDSVE
LLDVSSELPELARRPGLSTWKVRDRGSWFGVHEDVPRYRKSVISPSMFPSGKGSKDIEVN
TDVLDADMKDSTDMGEEGEQERNTAIDDSNNGDSAKTEEKTEVDCESGEAPTRYKKLNST
STRTEHSDYPLHRCMRIVPHDQNSGAFFIAVLHKHSPLNENQVVDWVKSEQSIPEDKTGK
LEKDLGSDKVSSEENIVPQQVVDNTNVVDGEQNGDMDSKSSKDKSSEDAKVIVDEAEKGQ
AGTRDRRRQQNQGRWRGVDPVIFFKDEVTIKSIVSFYGIKDSFPLEGHLVTRNPDTSHVK
RIYYVSKSVQDVLELNIKVGERLKITSLGLKIFERQSSKDGSPCTFRLSSEGLPLLLPYI
TKQILYASAIDFQHLLQYRTIKFPDFVDAKFGEEASALLPGCCVVVLREGHQDIGSIATD
PSAIAIVCWKGKTNLCVMLSPLDGKELLERISLRFGLKIPKLDKEKPNQEVTGSGEQPDC
ANEADDQPESKASDMEIPDAEAE
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcgggcggaagcgcgggcggacgcagcgccgccacttcaagcagggccgcgag
aacgtctggaagcacaacccccagcgccctcccgccggcgaagcgggcgaggggcgcgag
gggaatccctcgtggcagcccttcgccaccgagaacccggccttcgaggagtactacaag
gagcagcaaattattcctgaggaagagtgggatgatttcataagtatgctccgaaagcca
ttacctgccacttttaggattaatgcgagctgtcagttttttcaagatatctgctcacaa
ttggaaaacgacttcagaaaatcattagagactgaggtaagcgatgagcatggagaagat
gctatccggcctttgccttggtaccctggtaatcttgcatggcatttgaacttttcccga
atgcaactgaggagaaaccaggcacttgagagttttcatgaattcttgaagcgagagaat
gaagttggcaacataactaggcaagaggctgtcagtatggtcccaccgttgtttctgaat
gtacaacctgatcatcatattcttgacatgtgtgctgctccaggatctaaaactttccag
ttactagagatgattcaccagtcaacgaaacctggattgcttcctaatgccctggtggta
gctaatgatgtcgatgtgcaaagatgcaatcttcttattcatcagacaaagagaatgtgc
acagccaacctgattgtgacaaatcatgaagcacaaaactttcctggttgtaatcttgcg
aaattctgttcagaaacatgtatggatgaggccaagctgcagaggttggagttcgaccgc
gtgctttgtgatgtgccttgtagcggtgatgggaccgtccgcaaggctcctgatatgtgg
aggaagtggaatgctggtatggggaatggacttcatcgtctgcaagtagaaattgctatg
cgtggtatgggtttgcttaaagtgggtgggaggatggtttattcaacatgttcaatgaac
cctgttgaaaatgaagctgttgttgctgagattctacggagatgtggggactctgttgaa
cttcttgacgtttccagtgagctgcctgaattagcccgtcgtcctggacttagcacctgg
aaggtacgagatagaggttcttggtttggtgttcatgaagacgttcctcgctacaggaag
agtgtgatatcaccaagcatgtttccctctggtaaaggcagcaaagatattgaggtcaac
acagatgtacttgatgcagacatgaaggattcaacagacatgggagaagagggagaacaa
gaaagaaatacagcaattgatgacagcaataatggtgacagtgcgaaaactgaagagaag
actgaagttgattgtgagtctggtgaagctccaactagatataaaaagttaaattctact
tccacccgaacagaacattcagattacccattgcatcgttgcatgaggattgttcctcat
gaccagaacagtggggcatttttcattgcagtgcttcataaacactctcctctgaacgag
aaccaggtggtagattgggtaaaaagtgagcaaagtatcccagaagacaagactgggaaa
cttgagaaagatttaggatcagataaggtatcatctgaagaaaatattgtgccccagcaa
gtggttgataacacaaatgttgtcgatggagaacaaaatggagacatggatagcaaaagt
tcaaaagataagagctctgaggatgctaaggtgattgttgatgaggcagaaaaaggtcaa
gcaggaacaagagataggaggaggcagcagaaccaaggcaggtggagaggggttgaccct
gtgatattttttaaagatgaagtgacaatcaaaagtatagtatctttctatggtatcaag
gattcatttccacttgaaggtcatctcgtgactaggaatcctgatactagtcatgttaag
agaatatactatgtgtcaaaatctgttcaagatgttttggagctcaacataaaagttggc
gagcggcttaagatcacctcacttggcctaaagatatttgaaagacagtcatcaaaggat
ggctcaccgtgcacgtttaggttgtcatcggagggattgccactcctgcttccgtacatc
acaaaacagattctttatgcatcggcaattgacttccagcatcttttacagtacaggact
attaagtttcctgattttgtggatgcaaaatttggcgaggaagcttcagctttacttcca
ggttgctgcgttgtagtattacgcgaagggcatcaggatataggatctatagccacagat
ccctctgcaattgccattgtttgctggaagggaaagaccaatttgtgtgtcatgttatct
ccactggatgggaaggagttgcttgagaggatctcgttacgttttgggctcaaaatcccc
aaattggataaagagaaacccaaccaggaggttactggatctggtgagcagcctgattgt
gccaatgaggcagacgatcaacctgaaagcaaagcatcggacatggagattccagatgct
gaggctgagtag
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