Panicum virgatum (switchgrass): 120681990
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Entry
120681990 CDS
T07260
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic-like
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120681990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120681990
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
120681990
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120681990
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
hDGE_amylase
Motif
Other DBs
NCBI-GeneID:
120681990
NCBI-ProteinID:
XP_039819631
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Position
7N:complement(28028180..28038810)
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AA seq
911 aa
AA seq
DB search
MQSASARPLPPRSPAVALSPFSLPDPPQLLAPGIIISRAAPPPPRPRPPPPLPPRTRSLT
VCRAGGRARICRGMASFAVSGARLGVVRPGGGAARSGAERRSGVDLPPVLFRRKDSFSRT
VLSCAGAPGKVLVPGGGNDDLLSSAEPAVDTPVQSEELEVPDEAELVVEETASSSVAQAS
SAVEVEEKTEPSEVIESTSKTETDGVAVETKVQLVEEKPRVIPPPGDGQRIYQIDPMLEG
FRNHLDYRYSEYKRMRAAIDQHEGGLDAFSRGYEKLGFTRSAEGITYREWAPGAHSAALV
GDFNNWNPNADTMTRNEYGTWEIFLPNNADGSPAIPHGSRVKIRMDTPSGVKDSIPAWIK
FSVQAPGEIPYNGIYYDPPEEEKYVFKHPQPKRPKSLRIYESHVGMSSPEAKINTYANFR
DEVLPRIKRLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEDLKSLIDKAHELG
FLVLMDIVHSHASNNTLDGLNGFDGTDTHYFHGGPRGHHWMWDSRLFNYGSWEVLRFLLS
NARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYGEYFGFATDVDAVVYLMLVNDLI
HGLYPEAVAIGEDVSGMPTFCIPVQDGGVGFDYRLHMAAPDKWIELLKQSDEYWKMGDIV
HTLTNRRWLEKCVTYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHK
MIRLVTMGLGGEGYLNFMGNEFGHPEWIDFPRGPQSLPNGSVIPGNNYSYDKCRRRFDLG
DADYLRYHGMQEFDQAMQHLEEKYEFMTSDHQYVSRKHEEDKVIIFERGNLVFVFNFHWS
NSYFDYRVGCFKPGKYKIVLDSDDGLFGGFSRLDHEAEYFTADWPHDNRPCSFSVYAPSR
TAVVYALAEDE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgccagtgccaggccacttcctccccgatcccccgcagttgctctctccccc
ttctccctccccgatcccccgcagttgctcgctcccgggataataatatcccgcgccgct
cctcctcctcctcggcctcggccgccgccgccgctccccccgcgcacgcgctcgctcacg
gtgtgccgcgcgggtggcagggctcggatctgccgcgggatggcgtcgttcgcggtgtcc
ggcgcgaggctcggggtcgtgcggcccggcggcggcgcggcgcgatccggcgcggagcgg
aggagcggggtggacttgccgccggtgctcttcaggaggaaggactcattctcgcgtacg
gttctgagctgcgcgggtgctcctggaaaggtgctagttccgggaggtggcaacgatgac
ttgctttcctccgcagagcctgccgtggacactccagtgcagtctgaagagctagaggta
cctgatgaagcagaactggttgtggaagagacagcgtcctcatcagtggctcaagcgagc
tcagcagttgaggttgaagagaagactgaaccctccgaagtgattgaaagcactagcaaa
actgaaactgatggcgtagccgtcgaaaccaaagtacaactcgtggaggagaaaccacga
gttatcccaccaccaggagatggccagcgaatataccagattgacccaatgcttgaaggg
tttcggaaccatcttgactaccgatacagcgaatacaagagaatgcgtgcagctattgat
caacacgaaggtggattggatgcattttctcgtggttatgaaaagctgggatttactcgc
agtgctgaaggtataacttacagagaatgggctcctggagcacactcagcagcattagta
ggtgacttcaacaactggaatccaaatgcggatacaatgaccagaaatgagtatggcact
tgggagattttcctgcctaataatgctgatggatcccctgctattcctcatggctcgcgt
gtgaagatacggatggatacaccatctggtgtgaaggattccattcctgcctggatcaag
ttttctgtgcaggctccgggtgaaataccatacaatggtatatattatgatccacctgaa
gaggagaaatatgtcttcaaacaccctcaacctaagcggccaaagtcactgcggatttac
gaatcacatgttggaatgagtagcccggaagcaaagataaacacgtacgctaacttcaga
gatgaggtgctgccaagaattaaaaggctgggatataatgcagtacagatcatggcaatc
caagaacactcttactatgcaagctttgggtaccatgttacaaacttttttgcaccgagt
agccgttttgggactccggaggacctaaaatctctgatcgataaagcacatgagcttggg
tttctagtgcttatggatattgttcatagtcatgcatcaaataataccctggatggtttg
aatggttttgacggcactgatacacattacttccatggtggtccacggggccatcattgg
atgtgggattctcgcctattcaattatgggagttgggaagttttgagatttctactgtca
aatgcgagatggtggcttgaagaatataagttcgatggtttccgatttgatggggtgact
tccatgatgtatactcaccatggattacaagtagcatttactgggaattatggcgagtat
tttggatttgccactgatgttgatgcagtagtttacctaatgctggtaaacgatcttatt
catgggctttatcccgaggctgtagccattggtgaagatgttagcggaatgcctacattt
tgtattcctgttcaagatggtggtgttggttttgattaccgccttcatatggctgcccca
gacaaatggattgaactcctgaagcaaagtgatgaatattggaaaatgggtgatatcgtg
cacaccttaacaaatagaagatggctagaaaagtgtgtcacttatgctgaaagtcatgat
caagctctagttggtgacaagacaattgcattctggttgatggataaggatatgtatgat
ttcatggctctggacaggccttcaacgcctcgcattgatcgtgggatagcattacacaaa
atgattaggcttgttacaatgggtttaggaggtgaaggctatctaaatttcatgggaaac
gagtttggtcatcctgaatggatagattttccaagaggtcctcaaagtcttccaaatggc
tccgtcattcctggaaataactatagctacgataaatgtcgtcgtagatttgaccttgga
gatgcagattatcttaggtatcatggtatgcaagagtttgatcaggccatgcagcatctt
gaggaaaaatatgaattcatgacatcagaccaccagtatgtatcacggaaacatgaggag
gataaggtgataatctttgaaagaggaaatttggtatttgtgttcaacttccactggagc
aatagctattttgactaccgcgttggttgtttcaagcctgggaagtacaagattgtctta
gattctgatgatggcctcttcggtggatttagtcggcttgatcacgaggctgagtacttc
actgctgactggccgcatgacaacaggccgtgttctttctcggtgtatgcacccagcaga
acagccgttgtgtacgcactcgcagaggacgaatag
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