Panicum virgatum (switchgrass): 120681997
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Entry
120681997 CDS
T07260
Name
(RefSeq) protein AAR2 homolog isoform X1
KO
K13205
A1 cistron-splicing factor AAR2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120681997
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120681997
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Gene cluster
GFIT
Motif
Pfam:
AAR2
AAR2_1st
DUF5111
Motif
Other DBs
NCBI-GeneID:
120681997
NCBI-ProteinID:
XP_039819648
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Position
7N:complement(5985478..5994521)
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AA seq
434 aa
AA seq
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MASGGGAAARMDPEAATELVRKGSTLVLLDVPQRTLFGIDTQVFSVGPKFKGMKMVPPGP
HFVYYCSSSRSGNEFAPTVSFFLITQPSEVIVRKWDAQEERLIKLSEEEEIRYSEAVRRF
EFDDQLGPYNLDSYGDWKQLSSYLSQSAIERLEPIGGEITIALESSWMDKAPQSDMERRL
MEQLRESKFTKNAPVQAERRGCYYTSIPASVKHKNVSGVDLTALNLDKSSLLESVLAKNY
QGQEDLLLGELQFAFIAFMMGQSLEAFMQWKALVSLLLSCSEAPLHTRTNLFVKFLRTFY
YQLKHGFQRTQDSRNEDVSNSLFLDEAWFSRDIFLYRLSKDFFTVVFEAPVVDGDLVSWA
RKLKTLLETTFGWDLEDNAMNLIDEDDEANEVGFHDISGSYYALKNAETMQWSNLLYFHW
YVKSRHAHNGIKIL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcggcggcgctgcggcgcggatggacccggaggcggcgacggagctggtg
cggaagggctccacgctcgtcctgctcgacgtcccccagcgcacgctcttcggaatcgat
acgcaggtgttctctgtcgggcccaagttcaaagggatgaagatggtgcctccggggccc
catttcgtctactactgctcctccagcaggagtgggaatgagtttgcgcctactgtcagt
ttctttcttattactcaaccatctgaggtgattgttcgaaagtgggatgcacaagaggag
aggttaatcaagttgtcagaagaggaggaaatcagatactctgaagcagtaaggcgcttt
gagtttgatgatcagcttggaccatacaatttggattcttacggagattggaaacaactt
tcaagctacttgtcacagagtgccattgagcgtcttgaaccaattggaggggaaattaca
attgcattggagtcatcatggatggataaagctccccaaagtgacatggagagacgcttg
atggaacaattaagagagagcaagtttacaaaaaatgctcctgtgcaggctgagcggaga
ggatgctactacacaagtatccctgcctcagttaagcataagaacgtctccggggttgac
ttgacagcactgaacttggacaaatcaagcttgctggaaagtgttttggccaaaaattat
caaggacaagaagatttactcttgggggagttgcagttcgctttcatagcttttatgatg
ggccaatcgctggaggctttcatgcagtggaaagcattagtcagtcttctcttgagctgt
agtgaagctcctcttcatacaaggactaacctgtttgtaaagtttcttaggacattttac
tatcaactcaagcatgggtttcaacgtacccaagattccagaaatgaggatgtgagcaac
tctctgtttttggatgaagcatggttttcaagagacatattcctttaccgtctttccaag
gatttctttacagtagtatttgaagcccctgtcgtggatggagaccttgtatcatgggct
agaaaactaaaaacgcttctggagactacatttggatgggatctcgaggacaatgcaatg
aacctcattgatgaagatgatgaggctaatgaagttggattccatgacatctctggaagt
tattacgccttgaagaatgcagaaaccatgcaatggtccaaccttttatactttcattgg
tatgttaagtcacgtcacgcacacaatggtattaagatcttatga
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