Panicum virgatum (switchgrass): 120682021
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Entry
120682021 CDS
T07260
Name
(RefSeq) cell wall protein DAN4-like
KO
K14972
PAX-interacting protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120682021
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
120682021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med15_C
Motif
Other DBs
NCBI-GeneID:
120682021
NCBI-ProteinID:
XP_039819680
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Position
7N:complement(6675593..6679589)
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AA seq
805 aa
AA seq
DB search
MVQPVASEKLKQLALQMQPSDFSGCNPNRITQPQGQPVQPNVQQNPFGKNGMLPKELMMV
NQKGLGFNQQQTMDRQKYQMQVHNGHLGAQNTQPGVTIGLGSKLRMHEQEALNEHIEIES
QPVALPQQLITASQQNILFSTTGNAGEVDWREEMFQKIKPLKDAYLLELMELDKAILVPK
LSQKQLESLPNERAQQYRFRVHLKQKTKLMVKFLLLEKSSIPDNYRGQLSMFLKSIQDLL
GFYRRSRNRYQISHGQPKIINLIGDQAPSSAGTSHQNQQEQPVNTQLMKNIITTTPAAQE
INSNSLLGVESSCFPKKTRGLVQSLPIDKLQECCTQTLSLAIKAGTVKVSSPSQVSTSSS
PISTPRDANPTTSSSVSVKSTLPSSVAKPGVLKVASSCASGNSMLPSSFAQSTSIQAVSP
CASAKSSLPSSPFANPGVIETTSSVTNSGCDPAALPCPSVHPTSSDNFESFYGSLLQDIS
ATTSAQTVVGGTATAAENCIKQVTTIKPIMPSAPLLAEIVDHQAEDKDDPRNEILEAKRP
IDRLLDAVRTSSPAMLCSAANSVCSVLNSNNWVQQSEMDTFEDWAFFSEQCGSSTANKMK
RDLESTSLYSESAPQGIMGASCLTFDCTASEDEYSVERRARRQKTQNAKDTLLDEINSAN
SMLLDTIISIANDNGTDGISSSCGGTMVKLFYTATSLAPDLASLFATPGMCIVIPLKLLV
PADYPRSSPMLVCDKGDEQMRKRFNAISGTLDVAFRQALCGLPDPMSVLDIAKAWDASVR
RAVVEFAQRHGGGTFSSSYGEWARC
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggtacaaccagtagcatctgaaaagttgaagcaactagccttgcaaatgcagccctca
gacttttcaggatgcaacccaaatagaattacacagccacaaggacagccagttcaacca
aatgtgcagcagaatcccttcgggaaaaatggtatgttgccgaaggaactcatgatggtg
aatcaaaaaggtttggggttcaaccaacaacagacgatggataggcaaaagtaccaaatg
caggtgcataatggtcatcttggagcacagaatactcaacctggtgtaacaattggatta
gggtcaaagctgaggatgcatgaacaagaggcactcaatgaacatatcgaaatagaatct
cagcctgtggccctacctcagcagctgatcaccgccagtcagcaaaacatcttgttctca
actacgggaaatgctggagaagttgattggagggaggaaatgtttcagaagatcaagccg
ctaaaggatgcttaccttttagagctcatggaattggataaagccattcttgttccaaaa
ctttcacagaagcagcttgagtcattacccaatgaaagagctcaacaatacagatttaga
gtacacttgaagcagaaaacaaaactgatggtgaaattcttactgctagagaaaagcagc
atccctgacaactacagggggcagctctccatgtttctcaagtccatacaagatttgcta
ggtttctacaggagaagtagaaataggtaccagatttctcatgggcagcctaaaataatc
aatcttattggtgatcaggctccatccagtgctggtacaagccatcaaaatcagcaagaa
caacctgtaaatacccagttgatgaagaatattataactacaacaccagcagctcaagaa
atcaatagcaacagcttgttaggagtagaaagctcttgtttccctaaaaagacacgagga
ttggtgcagtctttgccaatcgataagcttcaggagtgttgcacacagacactttcactt
gctatcaaggcaggcactgtaaaagtctcttcaccttctcaggtgtccacatcctcatca
cccatttctacgccaagagatgcaaatcctacaacctcatcctctgtttctgtgaagtcc
acattgccatcatcagttgccaagccaggtgttttaaaagttgcctcgtcatgtgcttca
gggaactctatgttgccatcatcatttgcccaatctacttctatacaagctgtttcacca
tgtgcttcagcaaaatcatcattgccatcatcaccctttgccaatcctggtgttatagaa
accacttcatccgttaccaattcaggttgtgatccagctgctttgccctgtccttcagtg
caccctacatcatccgacaacttcgagagtttttatggctcactactacaagacatctca
gcaactaccagtgcacagacagtagtaggaggaacagcaacagctgcagaaaattgtatt
aaacaggtcactaccattaaaccaatcatgccatccgcaccacttctggcagaaatagta
gatcatcaagcagaggataaggatgaccctagaaatgaaatactggaggctaagaggccc
atcgatcgcctacttgatgcggtgcgtacttcatcaccagcgatgctttgtagcgcagct
aattctgtctgctcagtcctcaactcgaacaattgggtacaacagagcgaaatggatacc
tttgaggattgggcattcttctcagagcagtgtggatctagcactgcgaacaaaatgaag
cgtgatttggaaagtacatcattgtattctgagtcagcaccacagggcatcatgggtgca
agttgcttgacatttgattgcactgcctccgaggatgaatacagtgtagaacggcgtgct
agaaggcaaaaaacacaaaatgctaaggatactctgttagatgaaataaactctgcaaac
agcatgttgttagataccattatcagcatcgctaatgacaatggaacagatgggatctcc
tctagctgtggtgggacaatggtcaagctcttctacactgccacatcactcgcaccagac
cttgcatcgctctttgcaacacctggaatgtgtatcgtcatacccctgaagctcttggtc
cctgcagattatccaagaagctctcctatgcttgtctgtgacaagggtgatgagcaaatg
aggaagaggttcaatgccatttctggcacactggacgtagccttccggcaggccctctgt
ggactcccagatcccatgtcagtcctagacatcgcaaaggcgtgggatgcctccgtacgg
agggcggtcgtggaatttgcacagaggcacggtgggggaacattcagctccagctacggt
gagtgggctaggtgctga
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