Panicum virgatum (switchgrass): 120682068
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Entry
120682068 CDS
T07260
Name
(RefSeq) coatomer subunit beta-1-like
KO
K17301
coatomer subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120682068
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120682068
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120682068
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120682068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Arm
Motif
Other DBs
NCBI-GeneID:
120682068
NCBI-ProteinID:
XP_039819747
LinkDB
All DBs
Position
7N:complement(7823536..7828738)
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AA seq
506 aa
AA seq
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MAMENTAPCDDFLMIMADLESENPVANVAAINHASALIARGKLPESLLLCRLIAGLASNL
AKPHHEVIVKKDVYSILKAIRDVIISNYMNMDSACDEALHAIRCCFMDEFFRHIQHNPRM
VRLWTVQDQLTALKTLCTFFRSSPENINDTSCVAAFASLMLSPHVTVVRACAGTLPSLSI
VPGFAFALARAYCNLLEVFPPQSSLQISSAVLVLDRLKQISMTLVDHPRFDELALDVLGA
LANPNFAVRKKVLNLVVSFLTPGNVGDVLRILMNALDLAATSDIPNEYQKMLDEAITECH
SAYRESIMQIILDPKYLVFINCIRYMKDIMDCNPLLGPQLLKGLLRALRHVRSSPVCAAA
VWAISVCSDSLLETRGAMVAISPLFKDLLDRRDLEKLIIGGGEVEHEYMLASDCYGIKEG
DAQEQPLQPWLMEMEELLFVHIGLTRQADGSYAIASSSQSSASSEDVPSLNHTDNLAFVV
QSGDVLLADFVESMLSKLVDEDEEEQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccatggagaacaccgcaccgtgcgacgatttcttgatgatcatggccgatctcgag
tctgagaatccggttgccaacgtagcagctataaaccatgcctcggcgttgatagctaga
ggtaaactccctgaatccctgctcctatgccgcctaatcgctggccttgcttccaatttg
gcgaagcctcaccatgaagttatcgtcaagaaggatgtctactcaatcttgaaggcaatc
agggacgtcatcatcagcaattacatgaacatggactcagcttgtgatgaggctctccat
gccatccggtgttgtttcatggatgaattctttcgccatattcagcataacccacgcatg
gtgaggctgtggacagtccaggaccaattgactgcgctgaaaaccttatgtaccttcttt
cgtagctcaccggaaaacatcaatgacactagctgtgttgcagcctttgcctcactgatg
ctgtcaccgcatgtcaccgtggtacgtgcatgcgcgggcacccttccctctctgtccatt
gttccaggctttgcatttgcattggcacgagcctattgcaatcttctcgaagtatttcca
ccgcaatcatcacttcagataagcagcgcggttttagtgcttgacaggctgaagcagatt
agcatgaccttggtggatcaccccaggttcgatgagctggccctggatgtactaggggct
ttggcaaatcccaattttgctgtgcgaaagaaggttctgaacttggtggtgagcttcctc
acccctgggaatgtcggtgatgtgctacggatccttatgaacgcactggatttggcagcc
acttcagacatccctaatgagtatcaaaagatgctggatgaggcgattacagaatgccac
tctgcttatcgagaaagtattatgcaaatcatactagatccaaagtaccttgtgttcatc
aattgtattcgctacatgaaggacatcatggactgtaaccccttgttgggtccccagctt
ctaaagggtcttctaagggcgctccggcatgtcaggtcatcgcctgtgtgtgctgctgct
gtctgggccatctcagtgtgctctgattcactgttagagacccgtggcgccatggttgca
atttcacctctcttcaaggacctactggatcgacgtgatcttgagaaactgataattgga
ggtggagaagtggagcatgaatacatgcttgctagtgattgttatggtattaaagaggga
gatgcacaggaacagcccctgcagccatggctgatggagatggaggaacttctgtttgtg
cacatagggctcacaaggcaagcagatgggagctatgccatagcttcgagttcccagagc
agtgctagttctgaagatgtgccatcattgaaccatacagacaatctggcattcgttgtg
cagtctggagatgtgttattggcagatttcgtggaaagcatgctgtccaagcttgtggat
gaggatgaagaggagcagtaa
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