Panicum virgatum (switchgrass): 120682069
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Entry
120682069 CDS
T07260
Name
(RefSeq) transcription factor E2FB-like
KO
K06620
transcription factor E2F3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120682069
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
120682069
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Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
EzrA
DivIVA
TrmB
APG6_N
PUMA_CC
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
120682069
NCBI-ProteinID:
XP_039819753
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Position
7N:8116731..8123063
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AA seq
478 aa
AA seq
DB search
MDGGSSSLPLPHPPQVYLRRPVPPPGPPVTAPPRVHLFRPPVPIPIFSSRPRAAARPPIP
PAAAPAPTPQVAAAPAPPRPPPAAPTSTSAADKQPPPPGQPQAGLMLPPPAPKAAGKGTP
MPNPQPNEQHNGGENSQAEINMGETAQDKETISEPVKVMQRVKKLKVSKHSMGASDGSGA
VEGDAGPSLHSINHCRYDSSLSLLTKKFINLLQGAENGTLDLNKAAESLEVQKRRIYDIT
NVLEGVDLIEKGLKNMIRWKGFDISKPKEVECQISSLKEELESLYDEEVRLDDEIREAKE
KLQALTLDEDKRKSLYVLKEDINKIPHFQGSTLIAINAPHGTCVEVPDPNADLYLYGDLG
LQEKHYKIVLRSSMGPIDCYLISDQQEIFNTDKQVTAGKLEAVVATGSSQAVRQVDSDPN
QTPEKGQSNDVCTHTSESSREHEIISGILRIVPSDTNADSDYWLASDVDVSMTDAWGI
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggctcctccagcctccccctcccccacccgccgcaggtctacctacgccgc
cccgtgccgccgcccggcccgcctgtcaccgctcctcctagggtccacctgttccgcccc
ccggtgcccatccccatcttctcctcgaggccccgcgccgccgcgaggcccccgattcct
cctgctgctgctccagctcccactccccaagtggccgcagcgccggcgccccctcggccg
cctcctgcggcccccacctccacctccgccgccgacaagcagcctcctcctccgggccag
ccgcaagctggtttgatgctcccgcctccggctcctaaagcggcggggaaggggacaccc
atgcccaacccacagccgaatgagcaacacaatggaggagaaaattctcaagctgaaatc
aacatgggagagactgctcaagataaggagactatctctgaaccagtgaaagttatgcaa
cgagtaaagaagctaaaagtttctaaacacagcatgggcgcctcagatggttcaggagca
gttgaaggagatgctgggccttcattacattcgataaaccactgccgctatgatagctcg
ctaagtctgctcacaaagaagttcatcaacctgcttcaaggagcagaaaatggaaccctt
gatttaaataaagcagctgagtcgctggaggtgcaaaagaggaggatatatgatataaca
aatgttctagaaggtgttgatttaattgaaaaaggacttaagaatatgattcgctggaag
ggatttgacatatcgaagcctaaggaggtagaatgccaaatttcctcattgaaggaggaa
cttgaatctctttatgatgaagaggtcaggttggatgatgaaataagggaagcaaaagag
aaactacaagcccttacactagatgaggacaaaagaaagtcgttatatgttttgaaggaa
gatataaataagattcctcactttcagggatccacgcttattgctataaatgctcctcat
ggaacatgtgttgaagttccagaccctaatgcggatctgtacttgtatggggatctgggt
ttgcaagagaagcattacaaaattgtcttgagaagttcaatgggtcccatagattgctat
ttaataagtgaccaacaggagatatttaacacagataagcaggtgacagcgggcaaatta
gaagctgtggtcgccactggcagttctcaagctgtgcggcaggtggattctgatccaaat
cagacaccagaaaagggtcagagcaatgatgtttgcacgcatacatcagaatcatctaga
gagcatgagatcatttctggcattctgagaattgttccatcagataccaatgctgactct
gattactggctcgcttctgatgtcgatgttagcatgacagatgcatggggcatatag
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