Panicum virgatum (switchgrass): 120682100
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Entry
120682100 CDS
T07260
Name
(RefSeq) alpha-amylase type A isozyme-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120682100
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
120682100
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Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
120682100
NCBI-ProteinID:
XP_039819784
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Position
7N:complement(50154933..50157057)
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AA seq
434 aa
AA seq
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MGSRDLCCQLTTLLLLLGLASGQVLFQGFNWESWKQSGGWYNLLMGKVDDIAAAGVTHVW
LPPPSHSVSTQGYMPGRLYDLDASKYGTAAELKSLIAAFHGKGVQAVADIVINHRCADYK
DSRGIYCIYEGGTPDSRLDWGPHMICRDDTQYSDGTGNLDTGADFAAAPDIDHLDDRVQR
ELTEWLLWLKSDIGFDAWRLDFARGYSAEVAKVYVDGTAPSFAVAEIWNGMVPGDDGKPA
YDQDPHRQALVDWVNKVGGAASPATVFDFTTKGILNAAVEGELWRLIDAQGKAPGVIGWW
PAKAVTFVDNHDTGSTQAMWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGFKDEIAAL
VAVRKRNGITPTSQLTILEHDGDAYVAEIDGKVIVKIGARYDVGHLVPAGFEVAAHGNDY
AVWEKGAGQESNRL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcagggacctgtgctgccagctgacgaccctgctcctcctcctggggctggcg
tccggccaggtcctgttccaggggttcaactgggagtcgtggaagcagagcggcgggtgg
tacaacctcctgatggggaaggtcgacgacatcgccgccgccggcgtcacgcacgtctgg
ctcccgccgccgtcgcactccgtctccacccaaggttacatgcctggccggctttacgac
ctggacgcgtccaagtacgggacggcggcggagctcaagtccctgatcgccgcgttccac
ggcaagggcgtgcaggcggtggcggacatcgtcatcaaccaccggtgcgccgactacaag
gattcccgcggcatctactgcatctacgagggcgggacgcccgacagccgcctcgactgg
gggccccacatgatctgccgcgacgacacccagtactcggacggcacgggcaacctcgac
accggcgccgacttcgccgcggcgccggacatcgaccacctcgacgaccgcgtccagcgc
gagctcaccgagtggctgctctggctcaagtccgacatcggcttcgacgcctggcgcctc
gacttcgccaggggctactcggccgaggtcgccaaggtatacgtcgacggcacggccccc
agcttcgccgtcgccgagatatggaacggcatggtgcccggcgacgacgggaagcctgcc
tacgaccaggacccgcaccggcaggccctggtggactgggtgaacaaggtgggcggggcg
gcgtcaccggccacggtgttcgacttcaccaccaaggggatcctgaacgccgccgtggag
ggcgagctgtggcggctcatcgacgcgcagggcaaggcgcccggcgtcatcgggtggtgg
ccggccaaggccgtcacgttcgtcgacaaccacgacaccggctcgacgcaggccatgtgg
cccttcccctccgacaaggtcatgcagggctacgcctacatcctcacgcaccccggcaat
ccgtgcatcttctacgaccatttcttcgactggggtttcaaggacgagatcgcagcgctg
gtggcggtgcgcaagcgcaacggaatcacgccgacgagccagctcaccatcctcgagcac
gacggcgatgcctacgtggcggagatcgacggcaaggtgatcgtcaagatcggggctagg
tacgacgtcgggcacctcgtcccggcagggttcgaggtagctgcccacggcaacgactat
gccgtctgggagaaaggcgccggccaagaatccaaccgactataa
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