Panicum virgatum (switchgrass): 120682134
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Entry
120682134 CDS
T07260
Name
(RefSeq) synaptotagmin-5-like
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SLC3A2_N
MetOD1
Motif
Other DBs
NCBI-GeneID:
120682134
NCBI-ProteinID:
XP_039819822
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Position
7N:47630327..47636430
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AA seq
570 aa
AA seq
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MGFWVGMVLGIAAGVAIIVGFARCENSRAARRRELAATVASFSKMTIEDSRKLLPSDLYP
SWVVFSSQQKLKWLNQELTKIWPFVNEAASELIKISVEPVLEQYRPIIIASLKFSKLTLG
TVAPQFTGISIIENTQESGIVMELEMNWDANASIILDVKTLLGVALPIQVKDIGFTGIFR
LIFKPLVEELPCFGAVCFSLRKKKKLDFRLKVIGGEISALPGISDALEDTIKNAVEDSIT
WPVRKVIPIIPGDYSDLELKPVGTLEVKLVQARDLTNKDLIGKSDPFAIVYVRPLPDKMK
RSKTINNDLNPIWNEHFEFIVEDADTQTVTVKIYDDDGIQESDLIGSAQVRLKDLQPGKV
KDVWLKLVKDLEIQRDRKDRGQVHLELLYCPFDMKDEAPNPFAPQFTMTSLERTMTNMEN
RSGGSSFDMMSSSRKKKEIIMRGVLSVTVISGEDLPAMDMNGKSDPYVGLSLKKSKTKYK
TRVVNESLNPVWNQTFDFVVEDGLHDMLILEVYDHDTFRRDYMGRCILTLTKVMLEEEYE
ESFNLEGAKSGKLKLHLKWSPQPIMRDTRE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggggttctgggtggggatggttctggggattgcggcgggcgtcgccatcatcgtcggc
ttcgcccgctgcgagaactcccgcgccgcccggcgccgagagctggctgctactgttgct
agtttttcaaaaatgacaatcgaggattcacgaaagttactcccatctgacctgtaccct
tcctgggttgttttctcatcgcagcaaaagttaaaatggcttaatcaagagttgacaaag
atttggccgtttgtaaatgaggctgcatcagaactgatcaaaatatctgtagagcctgtt
cttgaacaatataggccaataatcatagcctccctgaagttctcaaaactcactcttgga
actgttgcaccacagtttaccggtatttccataattgagaatactcaggaatcaggtatt
gtcatggagctagagatgaattgggatgccaatgcaagtatcatacttgatgtaaaaact
ctacttggtgtggcacttccaatacaggtgaaggacattggctttacaggaattttccgc
ttgattttcaaaccacttgttgaagagctaccttgctttggagctgtttgcttttctcta
cgaaagaagaaaaagctggatttcagactgaaggtcattggtggtgaaatttctgcatta
cctggaatttcagatgctcttgaggacactataaaaaatgctgttgaagattcaataaca
tggcctgtaaggaaagtcattcctataatacctggggactacagtgatttggaactgaag
cctgttggtacattggaagtcaaactggtgcaagcaagagatttgacaaacaaagatctg
ataggaaaatcagatccttttgccattgtatatgtccgcccattgccagacaaaatgaag
agaagtaaaacaattaacaacgatcttaaccctatctggaatgaacactttgagtttatt
gttgaagatgccgatactcaaactgtaaccgtgaagatttatgatgacgatggtattcag
gaatctgatctgattggctctgctcaagtcaggctaaaggatctacaaccagggaaagtg
aaggatgtctggttgaagcttgtaaaagatctggagattcaaagggacaggaaagacagg
ggccaggtgcatcttgagctgctctactgtccatttgacatgaaggatgaagctccaaat
cctttcgcaccacagtttactatgacttccttggagaggacaatgacgaatatggaaaac
agatcaggaggatctagttttgacatgatgtcttcatcaaggaagaaaaaggaaattatc
atgcggggggttctgtcagtaactgtgatatccggggaggatttgccggcaatggatatg
aatggaaagtccgacccatatgttggcctttctctcaagaagtcaaaaacaaagtacaag
acaagggttgtgaacgaaagcttgaatccagtctggaaccagactttcgactttgttgtt
gaagatggcttacatgatatgcttatattggaagtatatgatcatgacacattccggaga
gattacatggggcggtgcatcctgaccttaacaaaagtcatgttggaagaagagtacgag
gaaagcttcaacctggagggggcaaagagcgggaagctgaagttgcatctgaagtggtcg
ccacaaccaatcatgcgggatacacgggaatag
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