Panicum virgatum (switchgrass): 120682147
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Entry
120682147 CDS
T07260
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120682147
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120682147
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120682147
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
120682147
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GFIT
Motif
Pfam:
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
120682147
NCBI-ProteinID:
XP_039819840
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Position
7N:complement(3559276..3582702)
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AA seq
561 aa
AA seq
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MASRPPLRTASVSSSTDSPTSAGPPGGVPQSITALLNNPLPSAAAASYSWLPWPPPNIAL
PKAAPTPPSHPCEVTGADFAPYLAAVSDPYARFADIRLHATAELAASSDAEGAPAASSVR
EVPALFFKEDFALEDGPTFQAACPLDDDGLQERLGQHLDVVEAHLVREIALRFESFYEAQ
GRLRGLDGEIVTAVGRIRELREVVRVLTRDLVVAARQVQELNATRGNLVELQQKLTVILY
VSQALAALKLLVVAADCAGALDVIDDLQNLLDTDELAGLYCFRHIQDQLGTSLDSVNSIL
SAELVHAAVPDGKAVDAMILSNVKRKASSPLNGTEHEICGNIDEEGSFTLRDRLLPLIIC
LLRTDKLPAFLRIYQDTLITVMKASIKATVAELLQVLTARPIDSDSVTGDRAADADAGGQ
SLANKLRSLSSEGFVQLLSAIFRIIQVHLQQAAKVKRIVEWIMGNLDGTLSVDASNPTAQ
HGGSVVSAISQENGYNISSRISSTLTWSTSKVPFVQGKANDLSIINSIKNVWFSRGRLAG
SRPRRMLLCTRSMLKMLGLES
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgcccgcccctccgcaccgcctccgtctcctcctccaccgactcccccacc
tccgctgggccccccggcggcgtcccgcagtccatcaccgcgctcctcaacaacccgctc
ccttccgccgccgccgcctcctactcctggctgccctggccgccccccaacatcgctctc
cccaaagcagctcccacgccgccatcgcacccctgcgaggtcaccggcgccgacttcgcg
ccctaccttgccgcagtctccgacccctacgctcgcttcgccgacatccgcctccacgcc
accgccgagctcgccgcctcctcggacgccgagggcgcccctgctgcctcctccgtccgc
gaggtgcccgcgctcttcttcaaggaggacttcgcgctcgaggacgggcccacgttccag
gcagcctgcccgctcgacgacgacgggctgcaggagcgcctcggacagcatctcgacgtt
gtggaggcgcacctcgtgcgggagatcgcgctgcggtttgagtccttctacgaggcgcag
ggccggctgcgggggctcgacggcgagattgttacggcagtagggaggattcgcgagctc
agggaggtggtccgggtgctcacgagggatcttgttgtggcagcaaggcaggtgcaggag
ctcaatgccacgcgtgggaaccttgtggaactgcagcagaagcttactgtcatcctctac
gtcagccaggcgcttgctgcgctcaagttgcttgttgtagcagcagattgtgctggtgcc
cttgatgtcatcgatgatttgcaaaatttactagatactgatgaacttgctgggctttac
tgctttcgccatattcaagatcagctgggaacgtcactagattcagtgaacagcattctt
tcagcagaacttgtgcatgctgctgttcccgatggaaaagctgtagatgctatgatttta
tcaaatgtgaaaagaaaggcttccagcccattgaatgggacagaacatgagatttgtggt
aacatagatgaggaaggaagttttactctcagagatcgtctcctccccctcattatttgc
ctgttgagaacggacaaacttcctgcgtttctcagaatctaccaggatacacttattact
gttatgaaagcttcaatcaaggccacagttgcagagttgcttcaagttttaactgccaga
ccaatagattctgattcagtaactggagacagggctgctgatgctgacgctggaggccag
tccttagcaaataagttgcgaagtctgtcatctgaagggtttgttcaacttttgtccgcc
atttttaggataatacaggtacatttacagcaagcagctaaagtgaaaagaatagttgag
tggatcatggggaaccttgatggaaccttaagtgttgatgctagcaatcctacagcacaa
catggtggttcagttgtttctgctatttcccaagagaatggctacaatatttcttcacgg
atctctagtactcttacatggagtacttccaaagtcccatttgtccaaggaaaagcaaat
gatttgtccatcataaattcaataaagaatgtctggttctcaaggggaaggttggccgga
tctaggccgagaaggatgcttctttgtacacgatccatgctaaagatgctggggttggag
agttga
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