Panicum virgatum (switchgrass): 120682150
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Entry
120682150 CDS
T07260
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120682150
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
120682150
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120682150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
120682150
NCBI-ProteinID:
XP_039819849
LinkDB
All DBs
Position
2K:complement(49354634..49357851)
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AA seq
527 aa
AA seq
DB search
MGGGGKAEKARRSSARVRLWVARASTVLLWTCVVHLAAYRELWAPSVLTRWPGCLTKPHG
VQLRSEAVATADGGQREAARSMALQPKRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARY
LNVTLIVPELDKASFWADPSDFQDIFDVDYFIASLRDEVRILRLLPPRLKRRAEMGFLHS
MPPISWSDISYYHHQILPLIRKYKVLHLNRTDARLANNGLPVEIQKLRCRVNYNALRFTP
EIENLGRRLVQALHRNGPFVVLHLRYEMDMLAFSGCTHGCSKMEAEELTKMRYAYPWWKE
KVIDSDAKRKDGLCPLTPEETALVLQALGIERSYQIYIAAGEIYGGQRRMAALTSAYPNV
VRKETLLPSDLSLFQNHSSQMAALDYMVSLESDIFIPTYDGNMAKVVEGHRRYLGFKKTV
LLDRRLIVELVDQYRNGTLSWADFSSSVKASHTSRMGEPSTRQAIPDKPKEEEYFYANPH
ECLHQPDDLSALWYPQYNTPHGRPFRIQNHSTLRQGWQGLYFRVHWQ
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggcgggaaggccgagaaggcgcggcggtcgtcggcgcgggtgaggctgtgg
gtggcgcgcgccagcaccgtgctgctctggacgtgcgtcgtccacctcgcggcctaccgg
gagctgtgggcgcccagcgtgctcaccaggtggcccggctgcctcaccaagccgcacggc
gtgcaactccggtcggaggcggttgctacggcggacggcggccagagggaggcagcgcgc
tctatggcgcttcagcccaaaagaatctacaaaaacaatggctatctgatggtctcctgc
aacggtgggcttaaccagatgcgagcagctatttgtgatatggtgacaattgcaaggtat
ctgaatgttactcttattgtaccagagctggataaagcttcattttgggctgatcctagt
gatttccaagatatattcgatgtggactacttcatagcatcactgagagacgaggtccga
attctgagactgctgcctccaagactgaaaagaagagctgaaatgggatttcttcactcc
atgccacccatcagttggtctgacatctcctattaccatcatcagattctacctctgata
aggaagtacaaggttcttcacctgaacaggacagatgctcgccttgcaaataatggctta
cccgtggagattcagaaactaaggtgccgtgtcaattataatgcactgagatttaccccc
gaaatagaaaacctggggaggcgtctggttcaagctctgcatcggaatggaccatttgta
gttcttcacttacggtatgagatggacatgctcgccttctctggatgcacacatggttgc
agcaaaatggaggctgaagagctcacgaaaatgagatatgcctacccatggtggaaggag
aaagtgattgactctgatgcgaagaggaaagatggcctgtgtcctttaacgccagaggaa
actgcattggtattacaggcactcggcatcgagcgcagttatcaaatttacattgcggca
ggtgaaatatatggtggacaaagaagaatggctgcccttacctctgcttatcccaatgtg
gttagaaaagagacactattaccttcagatctcagtcttttccagaaccattcatcccag
atggcagcactagattatatggtatccttggagagtgatattttcatccccacttatgac
ggtaacatggcaaaggttgtagaaggtcatcgcagatacttggggttcaagaagacggta
ctgctagatcggaggctcattgtggagctcgttgatcagtacagaaacggcacactgagc
tgggctgatttctcctcctctgtcaaggcatcacataccagccgcatgggggaaccgtct
acgaggcaggcgattcctgacaaacccaaggaagaggagtacttctatgcgaatccacac
gagtgtttgcaccaacctgacgatctgtcagccttgtggtacccgcagtataacacgcct
cacgggcggcctttcagaattcagaaccatagcacgcttaggcagggttggcaaggacta
tacttcagagtgcattggcaataa
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