Panicum virgatum (switchgrass): 120682233
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Entry
120682233 CDS
T07260
Name
(RefSeq) transcription factor E2FA-like isoform X1
KO
K06620
transcription factor E2F3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120682233
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
120682233
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Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
UPF0242
TrmB
Motif
Other DBs
NCBI-GeneID:
120682233
NCBI-ProteinID:
XP_039819985
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Position
7N:complement(28528612..28533498)
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AA seq
488 aa
AA seq
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MKIRWGNSPRLAVKKMSGGARAAAAQQIVQSLQRCAALPPAGPPFADALGDYHRFPRPSS
AAAAAAAAPLAGGHGGFEEGIVVGTPLKRKAPYGESNTAESLELVMTSPGFIGGVGSPLR
APVSGKSARTYKSKAKCSKPVPQTPISNAAPPGNPPTPAGPCRYDSSLALLTRKFINLLK
QAQDGILDLNSTADKLDVQKRRIYDITNVLEGIGLIEKKLKNIICWKGLGESGTNLDNDL
SILKNEVENLNLQEQALDEHISKMHKELKALTEDESRQRWLFLTEDDIKGLPCFQNQTLI
AIKAPHGSSVEVPNPDVMTGESFQRRYRIIIRSTTGPIDLYLVSNFEMKSEEKLDDTATL
ASQTHLAKRASSVKGPRTKRAGRSRSKEVEVNAQQIHKTPDLNAPHPSEGVLRKIDASDV
NTDADYWLLTDADVSITDMWRTAPAEMQLDQIDPNDFLSEEVSTPGPGTLDQQPAAIGEP
TAGGPNHG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaggtggggaaactccccccgtttggctgtcaaaaaaatgtcggggggcgcc
cgggcggcggccgcgcagcagatcgtgcagtcgctgcagcggtgcgcggctctcccgccg
gcgggcccgcccttcgcggacgcgctcggcgactaccaccgcttcccccggccgtcgtcg
gctgcggctgcggctgcggcagcgcccctggctggcggccacgggggcttcgaggagggg
atcgtcgtcgggacaccgctaaaaagaaaagcaccctatggagaaagtaatactgctgag
tcactcgaattggttatgaccagtcctggcttcattggaggagttggcagtccacttagg
gccccagtatctggaaaatctgcaaggacatacaagtcaaaggctaaatgcagcaaacct
gtacctcagacacctatatcaaatgctgctccacctggcaatccacctactccggctggt
ccttgccgctatgacagttcattagcactattgaccagaaagttcatcaatctgctcaag
caggctcaagatggaattctagatttgaacagcactgcagataagttagatgttcaaaaa
aggcgcatttatgacattacaaatgtcctcgagggaattggtttgatagaaaagaagttg
aagaacataatctgttggaagggtttgggtgaatcaggaactaatttggataatgatctt
tcaattctgaagaatgaagttgaaaatcttaatctccaggagcaagcattagatgaacat
ataagtaaaatgcacaaggaactgaaggcgttaactgaagatgaaagcaggcagaggtgg
ctatttcttaccgaagatgacatcaagggattgccctgctttcagaaccaaacactaatt
gcaataaaagcacctcatgggtcttctgtggaagtacccaatcctgatgtgatgactggt
gagagctttcaaaggagatatagaataattatacggagtacaacgggcccaattgatctc
tacttggttagtaactttgagatgaaatcggaggaaaagctggatgacactgcaacactg
gcaagtcagacacatttggcaaaacgtgcctcctctgtgaaaggccccagaacaaaaaga
gctggacgaagccgtagcaaggaggttgaggttaatgctcagcagatccataaaactcca
gatctaaatgctccacatccttctgaaggagtgttgaggaagattgatgcttcagatgtt
aatactgatgccgactactggctgcttacagatgctgatgttagcataactgatatgtgg
agaacagcaccagcagaaatgcagttggaccagatagaccccaacgatttcttatctgaa
gaggtgagcaccccaggcccagggacactcgaccagcagccagctgcaattggtgaacct
acagctgggggccctaaccatgggtaa
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